Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 AC136932.1-201ENST00000574771 208 ntBASIC3.97□□□□□ -1.77
NR1I3Q14994 AP000787.2-201ENST00000604432 568 ntBASIC3.97□□□□□ -1.77
NR1I3Q14994 MIR6716-201ENST00000613413 80 ntBASIC3.97□□□□□ -1.77
NR1I3Q14994 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1I3Q14994 AC022149.2-201ENST00000621061 203 ntBASIC3.97□□□□□ -1.77
NR1I3Q14994 AP000553.6-201ENST00000641242 118 ntBASIC3.97□□□□□ -1.77
NR1I3Q14994 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NR1I3Q14994 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NR1I3Q14994 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NR1I3Q14994 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NR1I3Q14994 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1I3Q14994 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
NR1I3Q14994 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1I3Q14994 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.16-201ENST00000362421 102 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 RNU6-774P-201ENST00000363238 107 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 RNU6-280P-201ENST00000364145 104 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.277-201ENST00000364754 102 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.405-201ENST00000383979 100 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.451-201ENST00000384200 100 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.524-201ENST00000384564 100 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.561-201ENST00000384694 100 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NR1I3Q14994 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NR1I3Q14994 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1I3Q14994 U3.39-201ENST00000408569 239 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 RNU2-20P-201ENST00000410425 191 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 RPS12P23-201ENST00000419579 400 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1I3Q14994 AC007919.1-201ENST00000429380 217 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 AC091286.1-201ENST00000431233 461 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 AL162151.2-201ENST00000448875 158 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 FABP5P15-201ENST00000453566 214 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 ANP32BP2-201ENST00000454525 545 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1I3Q14994 RNU6-406P-201ENST00000516470 107 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 Y_RNA.713-201ENST00000517013 96 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 SNORA31.20-201ENST00000517111 133 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
NR1I3Q14994 SRGNP1-201ENST00000603392 451 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 AC006077.1-201ENST00000604746 343 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1I3Q14994 U6.92-201ENST00000636464 89 ntBASIC3.96□□□□□ -1.78
NR1I3Q14994 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1I3Q14994 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NR1I3Q14994 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
NR1I3Q14994 SDAD1P2-201ENST00000441308 2028 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NR1I3Q14994 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1I3Q14994 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1I3Q14994 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
NR1I3Q14994 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1I3Q14994 MIR372-201ENST00000362225 67 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 Y_RNA.143-201ENST00000363520 106 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 Y_RNA.245-201ENST00000364493 95 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 Y_RNA.297-201ENST00000364950 91 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 Y_RNA.555-201ENST00000384673 110 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 SNORA12.2-201ENST00000391040 156 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 MIR190B-201ENST00000401119 79 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1I3Q14994 CYP4F29P-201ENST00000420685 446 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 AL139247.1-201ENST00000422768 325 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 TOMM20P4-201ENST00000427861 435 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 RPS6P12-201ENST00000432491 726 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1I3Q14994 AL513124.1-201ENST00000450410 614 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 AL645939.1-201ENST00000453429 797 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 U8.22-201ENST00000459141 133 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 snoU109.2-201ENST00000459316 135 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 RPS29P27-201ENST00000463711 170 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 S100A11P1-201ENST00000477525 312 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 AC087190.1-201ENST00000484462 480 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 AC107032.1-201ENST00000485945 480 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 AC011602.1-201ENST00000546484 331 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 SYF2P1-201ENST00000550658 413 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 MIR4300-201ENST00000581016 96 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 MIR376A1-201ENST00000616574 68 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 FTX_2.1-201ENST00000618816 94 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.95□□□□□ -1.78
NR1I3Q14994 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1I3Q14994 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1I3Q14994 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1I3Q14994 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1I3Q14994 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1I3Q14994 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1I3Q14994 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1I3Q14994 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1I3Q14994 DEFB108F-201ENST00000344638 222 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NR1I3Q14994 MIR335-201ENST00000362173 94 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 Y_RNA.123-201ENST00000363338 102 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 U3.13-201ENST00000364804 214 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 Y_RNA.439-201ENST00000384119 94 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 SNORA70C-201ENST00000384538 135 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 SNORD115-46-201ENST00000390982 71 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 RPL21P75-201ENST00000396599 483 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 RPL21P28-201ENST00000401418 483 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 RNU2-71P-201ENST00000411395 189 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 Z85995.1-201ENST00000415547 335 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms