Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 RPL7P43-201ENST00000478876 753 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 HMGB1P36-201ENST00000487709 576 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC020699.1-201ENST00000505161 445 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU6-143P-201ENST00000516942 93 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 DUXAP5-201ENST00000529668 529 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 OR5AL2P-201ENST00000532185 920 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC023538.1-201ENST00000534576 736 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 MIR3126-201ENST00000577443 74 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 BNIP3P31-201ENST00000604515 566 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC123912.5-201ENST00000605470 343 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AL589743.7-201ENST00000612637 233 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNY4P24-201ENST00000362735 96 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU6-1167P-201ENST00000363227 94 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU6-413P-201ENST00000384115 107 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU1-148P-201ENST00000384472 162 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU6-906P-201ENST00000384700 70 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 MIR1302-8-201ENST00000408342 128 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 MTND1P28-201ENST00000435623 950 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 MTCO1P53-201ENST00000441633 699 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RPL23AP6-201ENST00000446637 472 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RPS27AP10-201ENST00000496103 208 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 SNORA19.3-201ENST00000516165 130 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU6-581P-201ENST00000516214 105 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 MIR892C-201ENST00000516410 77 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 RNU6-572P-201ENST00000516724 80 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC022880.1-201ENST00000534017 973 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.43□□□□□ -2.18
CACNA1SQ13698 AL359212.1-201ENST00000556608 614 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 AC068276.1-201ENST00000605793 379 ntBASIC1.43□□□□□ -2.18
CACNA1SQ13698 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
CACNA1SQ13698 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC009518.2-201ENST00000418056 731 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.42□□□□□ -2.18
CACNA1SQ13698 EEF1A1P39-201ENST00000440791 250 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AL161788.1-201ENST00000441805 169 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 DDX3P2-201ENST00000446138 111 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 SNRPFP3-201ENST00000457792 225 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 HSPE1P23-201ENST00000509838 286 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.42□□□□□ -2.18
CACNA1SQ13698 AL121821.2-201ENST00000556081 394 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC090186.1-201ENST00000605991 572 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC009269.6-201ENST00000621778 588 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 AC112204.3-201ENST00000623822 332 ntBASIC1.42□□□□□ -2.18
CACNA1SQ13698 RNU6-942P-201ENST00000363002 107 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 RNU4-42P-201ENST00000364738 142 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 MTCO3P5-201ENST00000433620 714 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC112771.1-201ENST00000463581 102 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 MTND5P13-201ENST00000513046 1079 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AP005639.2-201ENST00000527592 928 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 CBX3P7-201ENST00000532876 502 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 BNIP3P23-201ENST00000599655 511 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AL358072.1-201ENST00000604156 575 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CACNA1SQ13698 RNU6-777P-201ENST00000364265 104 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 Y_RNA.234-201ENST00000364409 97 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 RNU5E-6P-201ENST00000365574 115 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AL158823.1-201ENST00000418441 478 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC006366.1-201ENST00000422002 759 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC012308.1-201ENST00000451232 178 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AP004247.1-201ENST00000531556 1289 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1SQ13698 AL713866.2-201ENST00000603579 219 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC069431.2-201ENST00000604149 1099 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AC072039.2-201ENST00000608883 439 ntBASIC1.41□□□□□ -2.18
CACNA1SQ13698 AP000776.1-201ENST00000530032 1663 ntBASIC1.4□□□□□ -2.18
CACNA1SQ13698 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
CACNA1SQ13698 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 RNU4-41P-201ENST00000364426 143 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 RNU1-39P-201ENST00000383897 165 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC078974.1-201ENST00000411597 223 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC137499.1-201ENST00000427602 88 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 AC108059.3-201ENST00000456388 214 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.4□□□□□ -2.19
CACNA1SQ13698 snoU109.1-201ENST00000459339 135 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 RPL37P6-201ENST00000460682 294 ntBASIC1.4□□□□□ -2.19
CACNA1SQ13698 KLF3P2-201ENST00000465138 268 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms