Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 MIR301A-201ENST00000385261 86 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HOXC5Q00444 AC092809.3-201ENST00000415453 231 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXC5Q00444 UBE2V1P4-201ENST00000425374 344 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AL591212.2-201ENST00000433923 257 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AC007327.1-201ENST00000447461 264 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXC5Q00444 AC108059.3-201ENST00000456388 214 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.18□□□□□ -2.22
HOXC5Q00444 RNU6-953P-201ENST00000459154 107 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.18□□□□□ -2.22
HOXC5Q00444 PTP4A1P4-201ENST00000512479 322 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 RNU6-1315P-201ENST00000517187 99 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXC5Q00444 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.18□□□□□ -2.22
HOXC5Q00444 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXC5Q00444 AL355472.4-201ENST00000610233 626 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 PART1_2.1-201ENST00000612397 250 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 AC107308.1-201ENST00000615897 301 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXC5Q00444 RNU6-944P-201ENST00000364023 107 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 RNU6-338P-201ENST00000383888 105 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 SNORA75B-201ENST00000384053 137 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 Y_RNA.534-201ENST00000384599 112 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 BTF3L4P2-201ENST00000392798 346 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC009310.1-201ENST00000414414 451 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 UBE2V1P10-201ENST00000414685 269 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC019070.1-201ENST00000415008 1024 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 MTND5P25-201ENST00000430499 799 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC012308.1-201ENST00000451232 178 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.17□□□□□ -2.22
HOXC5Q00444 AL583843.1-201ENST00000456070 346 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC098862.1-201ENST00000504991 413 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC116353.3-201ENST00000511215 249 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.17□□□□□ -2.22
HOXC5Q00444 RNU6-276P-201ENST00000516114 96 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 RNU6-914P-201ENST00000516749 109 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 RPS3AP4-201ENST00000555161 764 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AL157871.3-201ENST00000557231 293 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HOXC5Q00444 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXC5Q00444 AP001981.2-201ENST00000603241 418 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC022893.3-201ENST00000607665 437 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC097468.3-201ENST00000607956 456 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.17□□□□□ -2.22
HOXC5Q00444 uc_338.15-201ENST00000615470 191 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AL132822.1-201ENST00000617063 513 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 AC092656.1-203ENST00000624134 423 ntBASIC1.17□□□□□ -2.22
HOXC5Q00444 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXC5Q00444 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.17□□□□□ -2.22
HOXC5Q00444 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
HOXC5Q00444 RNU6-462P-201ENST00000362659 105 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 RNA5SP99-201ENST00000364020 114 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 SMIM11P1-201ENST00000369586 178 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 RNU6-611P-201ENST00000384276 104 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HOXC5Q00444 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HOXC5Q00444 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.16□□□□□ -2.22
HOXC5Q00444 RNU2-36P-201ENST00000410361 191 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXC5Q00444 AC009518.2-201ENST00000418056 731 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.16□□□□□ -2.22
HOXC5Q00444 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
HOXC5Q00444 AL606517.1-201ENST00000446914 387 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC245102.2-201ENST00000448956 180 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 RN7SKP210-201ENST00000459176 261 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC005908.1-201ENST00000468701 347 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC108210.2-201ENST00000503681 201 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 FAM206BP-201ENST00000510179 541 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.16□□□□□ -2.22
HOXC5Q00444 AC092451.2-201ENST00000538746 658 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC015712.3-201ENST00000559380 164 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXC5Q00444 AC012065.4-201ENST00000602445 679 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AL606834.3-201ENST00000602615 496 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AL670379.2-201ENST00000604983 252 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AL670379.4-201ENST00000605279 254 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXC5Q00444 MTND5P42-201ENST00000637720 498 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 HAUS6P2-201ENST00000433254 2404 ntBASIC1.16□□□□□ -2.22
HOXC5Q00444 RNU1-58P-201ENST00000362413 163 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 Y_RNA.40-201ENST00000362645 93 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 RNU6-1010P-201ENST00000362757 107 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 RNU6-529P-201ENST00000363383 104 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HOXC5Q00444 AL022400.1-201ENST00000423946 935 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 TIMM9P1-201ENST00000436122 256 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 LARP1BP3-201ENST00000437229 869 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.15□□□□□ -2.23
HOXC5Q00444 AL139824.2-201ENST00000458731 1095 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 snoU109.2-201ENST00000459316 135 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AL121594.1-201ENST00000475906 575 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms