Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL162713.1-201ENST00000604480 262 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC080078.3-201ENST00000605407 463 ntBASIC3.11□□□□□ -1.91
RAE1P78406 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.11□□□□□ -1.91
RAE1P78406 SNORA51-201ENST00000606420 132 ntBASIC3.11□□□□□ -1.91
RAE1P78406 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC009229.3-201ENST00000608056 282 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC019193.3-201ENST00000609144 554 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AL157817.1-201ENST00000614264 790 ntBASIC3.11□□□□□ -1.91
RAE1P78406 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.11□□□□□ -1.91
RAE1P78406 MIR8058-201ENST00000615737 89 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC244517.12-201ENST00000623581 663 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC138627.2-201ENST00000624202 601 ntBASIC3.11□□□□□ -1.91
RAE1P78406 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAE1P78406 CDC27P3-201ENST00000635418 1910 ntBASIC3.11□□□□□ -1.91
RAE1P78406 AC110491.1-201ENST00000562191 2010 ntBASIC3.1□□□□□ -1.91
RAE1P78406 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.1□□□□□ -1.91
RAE1P78406 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.1□□□□□ -1.91
RAE1P78406 Y_RNA.138-201ENST00000363462 102 ntBASIC3.1□□□□□ -1.91
RAE1P78406 Y_RNA.151-201ENST00000363566 112 ntBASIC3.1□□□□□ -1.91
RAE1P78406 RNU6-827P-201ENST00000365553 106 ntBASIC3.1□□□□□ -1.91
RAE1P78406 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.1□□□□□ -1.91
RAE1P78406 RNU6-310P-201ENST00000384655 107 ntBASIC3.1□□□□□ -1.91
RAE1P78406 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.1□□□□□ -1.91
RAE1P78406 RNU6-325P-201ENST00000411132 105 ntBASIC3.1□□□□□ -1.91
RAE1P78406 RNU6-1304P-201ENST00000411374 106 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AC097713.2-201ENST00000430199 356 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AL133396.1-201ENST00000432048 687 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.1□□□□□ -1.91
RAE1P78406 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
RAE1P78406 PCMTD1P1-201ENST00000455560 355 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.1□□□□□ -1.91
RAE1P78406 AL442663.2-201ENST00000554385 511 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AC009314.1-201ENST00000603871 304 ntBASIC3.1□□□□□ -1.91
RAE1P78406 MTND4LP5-201ENST00000605152 292 ntBASIC3.1□□□□□ -1.91
RAE1P78406 PISRT1.1-201ENST00000616930 107 ntBASIC3.1□□□□□ -1.91
RAE1P78406 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
RAE1P78406 U4.7-201ENST00000638126 106 ntBASIC3.1□□□□□ -1.91
RAE1P78406 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAE1P78406 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAE1P78406 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAE1P78406 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAE1P78406 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 Y_RNA.146-201ENST00000363549 102 ntBASIC3.09□□□□□ -1.91
RAE1P78406 RNA5SP50-201ENST00000363731 107 ntBASIC3.09□□□□□ -1.91
RAE1P78406 Y_RNA.187-201ENST00000363918 113 ntBASIC3.09□□□□□ -1.91
RAE1P78406 RNU1-33P-201ENST00000364249 162 ntBASIC3.09□□□□□ -1.91
RAE1P78406 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 RNA5SP44-201ENST00000410446 133 ntBASIC3.09□□□□□ -1.91
RAE1P78406 RNA5SP293-201ENST00000410527 113 ntBASIC3.09□□□□□ -1.91
RAE1P78406 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.09□□□□□ -1.91
RAE1P78406 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.09□□□□□ -1.91
RAE1P78406 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.09□□□□□ -1.91
RAE1P78406 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
RAE1P78406 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.09□□□□□ -1.91
RAE1P78406 MTCO3P10-201ENST00000455912 772 ntBASIC3.09□□□□□ -1.91
RAE1P78406 RPL30P15-201ENST00000457129 321 ntBASIC3.09□□□□□ -1.91
RAE1P78406 snoU13.28-201ENST00000459235 104 ntBASIC3.09□□□□□ -1.91
RAE1P78406 RN7SL293P-201ENST00000481765 281 ntBASIC3.09□□□□□ -1.91
RAE1P78406 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.09□□□□□ -1.91
RAE1P78406 AC093303.1-201ENST00000514549 295 ntBASIC3.09□□□□□ -1.91
RAE1P78406 Y_RNA.670-201ENST00000516255 105 ntBASIC3.09□□□□□ -1.91
RAE1P78406 RNU6-1213P-201ENST00000517075 94 ntBASIC3.09□□□□□ -1.91
RAE1P78406 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAE1P78406 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
RAE1P78406 CPDP1-201ENST00000579660 283 ntBASIC3.09□□□□□ -1.91
RAE1P78406 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 AC011494.1-201ENST00000596454 237 ntBASIC3.09□□□□□ -1.91
RAE1P78406 AL020997.2-201ENST00000602607 184 ntBASIC3.09□□□□□ -1.91
RAE1P78406 CYP2C61P-201ENST00000604072 290 ntBASIC3.09□□□□□ -1.91
RAE1P78406 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.09□□□□□ -1.91
RAE1P78406 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.09□□□□□ -1.91
RAE1P78406 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.09□□□□□ -1.92
RAE1P78406 MTND5P10-201ENST00000603719 1809 ntBASIC3.09□□□□□ -1.92
RAE1P78406 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.92
RAE1P78406 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.08□□□□□ -1.92
RAE1P78406 SNORA63-201ENST00000363450 132 ntBASIC3.08□□□□□ -1.92
RAE1P78406 RNU6-933P-201ENST00000384424 107 ntBASIC3.08□□□□□ -1.92
RAE1P78406 RNU6-1077P-201ENST00000410506 102 ntBASIC3.08□□□□□ -1.92
RAE1P78406 Y_RNA.646-201ENST00000410980 101 ntBASIC3.08□□□□□ -1.92
RAE1P78406 USP9YP30-201ENST00000430729 455 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC236972.1-201ENST00000433225 199 ntBASIC3.08□□□□□ -1.92
RAE1P78406 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RAE1P78406 AL714022.1-201ENST00000439897 151 ntBASIC3.08□□□□□ -1.92
RAE1P78406 HMGN2P10-201ENST00000448085 265 ntBASIC3.08□□□□□ -1.92
RAE1P78406 RNU7-170P-201ENST00000459303 61 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AL049830.2-201ENST00000480072 201 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC027575.1-201ENST00000481064 460 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms