Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPL39P5-202ENST00000512505 151 ntBASIC2.49□□□□□ -2.01
LMO4P61968 RNU6-390P-201ENST00000516259 103 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.49□□□□□ -2.01
LMO4P61968 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC090115.3-201ENST00000553218 849 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC138761.3-201ENST00000579993 334 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC002545.1-201ENST00000592511 181 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC016925.2-201ENST00000605108 242 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AL670379.4-201ENST00000605279 254 ntBASIC2.49□□□□□ -2.01
LMO4P61968 ATP1B3P1-201ENST00000605365 821 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC007619.2-201ENST00000605743 379 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.49□□□□□ -2.01
LMO4P61968 AC008121.3-201ENST00000618726 433 ntBASIC2.49□□□□□ -2.01
LMO4P61968 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LMO4P61968 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LMO4P61968 ZNF519P1-201ENST00000449011 1626 ntBASIC2.49□□□□□ -2.01
LMO4P61968 AC103988.1-201ENST00000566382 2177 ntBASIC2.49□□□□□ -2.01
LMO4P61968 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 Y_RNA.145-201ENST00000363527 102 ntBASIC2.48□□□□□ -2.01
LMO4P61968 Y_RNA.187-201ENST00000363918 113 ntBASIC2.48□□□□□ -2.01
LMO4P61968 Y_RNA.197-201ENST00000364004 102 ntBASIC2.48□□□□□ -2.01
LMO4P61968 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LMO4P61968 SNORD70.1-201ENST00000391007 85 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.48□□□□□ -2.01
LMO4P61968 PMCHL1-202ENST00000423102 261 ntBASIC2.48□□□□□ -2.01
LMO4P61968 MTND3P2-201ENST00000438452 342 ntBASIC2.48□□□□□ -2.01
LMO4P61968 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.48□□□□□ -2.01
LMO4P61968 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.48□□□□□ -2.01
LMO4P61968 AC104058.1-201ENST00000448028 297 ntBASIC2.48□□□□□ -2.01
LMO4P61968 FABP5P13-201ENST00000452144 328 ntBASIC2.48□□□□□ -2.01
LMO4P61968 MTCO3P10-201ENST00000455912 772 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AC104472.2-201ENST00000469035 601 ntBASIC2.48□□□□□ -2.01
LMO4P61968 RPS27P27-201ENST00000498779 255 ntBASIC2.48□□□□□ -2.01
LMO4P61968 TBCAP3-201ENST00000512475 312 ntBASIC2.48□□□□□ -2.01
LMO4P61968 RNA5SP217-201ENST00000515959 91 ntBASIC2.48□□□□□ -2.01
LMO4P61968 RNU6-1046P-201ENST00000516538 107 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AC022634.1-201ENST00000520765 532 ntBASIC2.48□□□□□ -2.01
LMO4P61968 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.48□□□□□ -2.01
LMO4P61968 AC104027.1-201ENST00000521887 300 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AP006587.4-201ENST00000526053 529 ntBASIC2.48□□□□□ -2.01
LMO4P61968 DNAJC8P1-201ENST00000554535 372 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.48□□□□□ -2.01
LMO4P61968 AC136443.5-201ENST00000603741 370 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AC019193.3-201ENST00000609144 554 ntBASIC2.48□□□□□ -2.01
LMO4P61968 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.48□□□□□ -2.01
LMO4P61968 uc_338.22-201ENST00000622722 187 ntBASIC2.48□□□□□ -2.01
LMO4P61968 AC073308.1-201ENST00000623696 305 ntBASIC2.48□□□□□ -2.01
LMO4P61968 MTND5P42-201ENST00000637720 498 ntBASIC2.48□□□□□ -2.01
LMO4P61968 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LMO4P61968 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
LMO4P61968 AL049641.1-201ENST00000441055 1948 ntBASIC2.48□□□□□ -2.01
LMO4P61968 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
LMO4P61968 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMO4P61968 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.47□□□□□ -2.01
LMO4P61968 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.47□□□□□ -2.01
LMO4P61968 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.47□□□□□ -2.01
LMO4P61968 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.47□□□□□ -2.01
LMO4P61968 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.47□□□□□ -2.01
LMO4P61968 Y_RNA.144-201ENST00000363521 113 ntBASIC2.47□□□□□ -2.01
LMO4P61968 SNORA5B-201ENST00000363786 132 ntBASIC2.47□□□□□ -2.01
LMO4P61968 RNU6-715P-201ENST00000365204 103 ntBASIC2.47□□□□□ -2.01
LMO4P61968 Y_RNA.500-201ENST00000384466 111 ntBASIC2.47□□□□□ -2.01
LMO4P61968 RNU6-851P-201ENST00000384565 107 ntBASIC2.47□□□□□ -2.01
LMO4P61968 SAR1AP2-201ENST00000392696 594 ntBASIC2.47□□□□□ -2.01
LMO4P61968 CISD1P1-201ENST00000393907 327 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL360182.1-201ENST00000397433 468 ntBASIC2.47□□□□□ -2.01
LMO4P61968 MIR450B-201ENST00000401182 78 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL139397.2-201ENST00000404529 772 ntBASIC2.47□□□□□ -2.01
LMO4P61968 SNORA11.2-201ENST00000408318 127 ntBASIC2.47□□□□□ -2.01
LMO4P61968 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMO4P61968 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.47□□□□□ -2.01
LMO4P61968 AC092809.3-201ENST00000415453 231 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.47□□□□□ -2.01
LMO4P61968 RPL31P12-201ENST00000422587 358 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL669831.1-202ENST00000428504 417 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC007919.1-201ENST00000429380 217 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.47□□□□□ -2.01
LMO4P61968 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.47□□□□□ -2.01
LMO4P61968 AL135938.1-201ENST00000443141 297 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL137792.2-201ENST00000443484 235 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC092798.1-201ENST00000458542 409 ntBASIC2.47□□□□□ -2.01
LMO4P61968 Y_RNA.653-201ENST00000459091 95 ntBASIC2.47□□□□□ -2.01
LMO4P61968 RN7SL20P-201ENST00000488827 297 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC008526.1-201ENST00000509149 338 ntBASIC2.47□□□□□ -2.01
LMO4P61968 MTCYBP40-201ENST00000509390 1135 ntBASIC2.47□□□□□ -2.01
LMO4P61968 SCGB1D5P-201ENST00000515134 247 ntBASIC2.47□□□□□ -2.01
LMO4P61968 RNA5SP367-201ENST00000516557 118 ntBASIC2.47□□□□□ -2.01
LMO4P61968 RNU6-1213P-201ENST00000517075 94 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.47□□□□□ -2.01
LMO4P61968 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms