Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 RNU6-78P-201ENST00000362897 107 ntBASIC3□□□□□ -1.93
SOX2P48431 RNU6-1317P-201ENST00000364582 104 ntBASIC3□□□□□ -1.93
SOX2P48431 RNU6-1040P-201ENST00000383974 107 ntBASIC3□□□□□ -1.93
SOX2P48431 MIR518D-201ENST00000385014 87 ntBASIC3□□□□□ -1.93
SOX2P48431 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3□□□□□ -1.93
SOX2P48431 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3□□□□□ -1.93
SOX2P48431 Z82205.1-201ENST00000428456 297 ntBASIC3□□□□□ -1.93
SOX2P48431 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3□□□□□ -1.93
SOX2P48431 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
SOX2P48431 AC013470.1-201ENST00000453438 462 ntBASIC3□□□□□ -1.93
SOX2P48431 MIR2053-201ENST00000459295 91 ntBASIC3□□□□□ -1.93
SOX2P48431 AP002884.2-201ENST00000471647 395 ntBASIC3□□□□□ -1.93
SOX2P48431 AC090096.1-201ENST00000489168 390 ntBASIC3□□□□□ -1.93
SOX2P48431 RPS29P20-201ENST00000489592 171 ntBASIC3□□□□□ -1.93
SOX2P48431 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3□□□□□ -1.93
SOX2P48431 PTP4A1P4-201ENST00000512479 322 ntBASIC3□□□□□ -1.93
SOX2P48431 SNORA64.4-201ENST00000516632 81 ntBASIC3□□□□□ -1.93
SOX2P48431 MIR2116-201ENST00000517221 80 ntBASIC3□□□□□ -1.93
SOX2P48431 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3□□□□□ -1.93
SOX2P48431 AC010186.2-204ENST00000537668 439 ntBASIC3□□□□□ -1.93
SOX2P48431 SNRPGP18-201ENST00000553000 214 ntBASIC3□□□□□ -1.93
SOX2P48431 AC109446.1-201ENST00000566172 220 ntBASIC3□□□□□ -1.93
SOX2P48431 CPDP1-201ENST00000579660 283 ntBASIC3□□□□□ -1.93
SOX2P48431 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3□□□□□ -1.93
SOX2P48431 SNRPGP17-201ENST00000603780 214 ntBASIC3□□□□□ -1.93
SOX2P48431 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3□□□□□ -1.93
SOX2P48431 AL138880.2-201ENST00000616214 239 ntBASIC3□□□□□ -1.93
SOX2P48431 MIR6134-201ENST00000617606 109 ntBASIC3□□□□□ -1.93
SOX2P48431 USP12-203ENST00000620323 349 ntTSL 3 BASIC3□□□□□ -1.93
SOX2P48431 RNA5SP196-201ENST00000625967 102 ntBASIC3□□□□□ -1.93
SOX2P48431 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3□□□□□ -1.93
SOX2P48431 U4.7-201ENST00000638126 106 ntBASIC3□□□□□ -1.93
SOX2P48431 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3□□□□□ -1.93
SOX2P48431 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
SOX2P48431 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX2P48431 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX2P48431 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX2P48431 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SOX2P48431 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
SOX2P48431 RN7SKP227-201ENST00000364445 330 ntBASIC2.99□□□□□ -1.93
SOX2P48431 RNA5SP51-201ENST00000364750 119 ntBASIC2.99□□□□□ -1.93
SOX2P48431 RNU6-842P-201ENST00000384269 107 ntBASIC2.99□□□□□ -1.93
SOX2P48431 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX2P48431 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX2P48431 AC245291.1-201ENST00000419501 328 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX2P48431 TRIAP1P1-201ENST00000427062 225 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC006946.1-201ENST00000429106 328 ntBASIC2.99□□□□□ -1.93
SOX2P48431 RPL23AP50-201ENST00000434149 455 ntBASIC2.99□□□□□ -1.93
SOX2P48431 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX2P48431 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX2P48431 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX2P48431 AC103987.1-201ENST00000473394 348 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC021205.2-201ENST00000480069 347 ntBASIC2.99□□□□□ -1.93
SOX2P48431 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX2P48431 RNU6-976P-201ENST00000516086 111 ntBASIC2.99□□□□□ -1.93
SOX2P48431 PARP1P2-201ENST00000556806 195 ntBASIC2.99□□□□□ -1.93
SOX2P48431 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.99□□□□□ -1.93
SOX2P48431 MIR5685-201ENST00000579080 79 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AL451007.1-201ENST00000595491 289 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC022432.1-201ENST00000595739 310 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC011890.2-201ENST00000613393 294 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC006111.3-201ENST00000622137 383 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AC138627.2-201ENST00000624202 601 ntBASIC2.99□□□□□ -1.93
SOX2P48431 AL079305.1-201ENST00000623159 3008 ntBASIC2.99□□□□□ -1.93
SOX2P48431 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX2P48431 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX2P48431 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SOX2P48431 RNU6-428P-201ENST00000362942 107 ntBASIC2.98□□□□□ -1.93
SOX2P48431 Y_RNA.132-201ENST00000363421 102 ntBASIC2.98□□□□□ -1.93
SOX2P48431 Y_RNA.202-201ENST00000364083 110 ntBASIC2.98□□□□□ -1.93
SOX2P48431 SNORA70.2-201ENST00000364506 135 ntBASIC2.98□□□□□ -1.93
SOX2P48431 RNU6-596P-201ENST00000365395 98 ntBASIC2.98□□□□□ -1.93
SOX2P48431 RNU6-331P-201ENST00000384724 107 ntBASIC2.98□□□□□ -1.93
SOX2P48431 snosnR66.1-201ENST00000391095 99 ntBASIC2.98□□□□□ -1.93
SOX2P48431 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX2P48431 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX2P48431 RPL7P2-201ENST00000427639 268 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC133134.1-201ENST00000466800 359 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX2P48431 AC096576.1-201ENST00000489014 359 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC114801.2-201ENST00000503825 781 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX2P48431 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX2P48431 SMURF2P1-201ENST00000514992 481 ntBASIC2.98□□□□□ -1.93
SOX2P48431 SCARNA16.2-201ENST00000516520 172 ntBASIC2.98□□□□□ -1.93
SOX2P48431 SNORA43.2-201ENST00000516652 128 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX2P48431 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SOX2P48431 AP000867.2-201ENST00000532468 320 ntBASIC2.98□□□□□ -1.93
SOX2P48431 ELOCP31-201ENST00000540463 467 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC005476.1-201ENST00000554427 397 ntBASIC2.98□□□□□ -1.93
SOX2P48431 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms