Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL353705.4-201ENST00000449661 238 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA4P43681 RN7SL459P-201ENST00000481078 302 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 AC012158.1-204ENST00000483430 465 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 AP003327.1-201ENST00000529684 127 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 BNIP3P5-201ENST00000562290 498 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.43□□□□□ -1.7
CHRNA4P43681 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRNA4P43681 MIR4715-201ENST00000584117 79 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA4P43681 AC069294.1-201ENST00000608397 350 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CHRNA4P43681 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA4P43681 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CHRNA4P43681 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA4P43681 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA4P43681 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA4P43681 AP001273.1-201ENST00000624493 3152 ntBASIC4.43□□□□□ -1.7
CHRNA4P43681 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA4P43681 MAPK10-286ENST00000641208 8747 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 MIR331-201ENST00000362302 94 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 RNU6-1155P-201ENST00000363554 107 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 SNORA25.7-201ENST00000364375 127 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 RNU6-336P-201ENST00000364891 107 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 RNA5SP22-201ENST00000365393 109 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 Y_RNA.388-201ENST00000383919 113 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 SNORA26.2-201ENST00000390922 122 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 SNORA40.5-201ENST00000391061 128 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 MIR1911-201ENST00000410783 80 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA4P43681 AC016712.1-201ENST00000431088 378 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 Y_RNA.651-201ENST00000459380 103 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 Y_RNA.637-201ENST00000459424 114 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 RPL35AP15-201ENST00000468042 339 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 RN7SL41P-201ENST00000476144 297 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRNA4P43681 HIGD1AP3-201ENST00000515857 278 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 Y_RNA.677-201ENST00000516401 85 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 RNU6-966P-201ENST00000516479 104 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 IGKV2D-36-201ENST00000518643 226 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 AC084851.1-201ENST00000529105 249 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 AC100770.1-201ENST00000532310 322 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.42□□□□□ -1.7
CHRNA4P43681 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.42□□□□□ -1.7
CHRNA4P43681 TOMM20P2-201ENST00000540082 421 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRNA4P43681 AC079587.1-201ENST00000603846 277 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 AC107294.1-201ENST00000609524 467 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CHRNA4P43681 AL138721.1-201ENST00000616756 179 ntBASIC4.42□□□□□ -1.7
CHRNA4P43681 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA4P43681 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRNA4P43681 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA4P43681 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA4P43681 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CHRNA4P43681 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA4P43681 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA4P43681 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA4P43681 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA4P43681 AC007390.2-201ENST00000606229 3803 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHRNA4P43681 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.41□□□□□ -1.7
CHRNA4P43681 MIR3065-201ENST00000390137 79 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 RNU6-1248P-201ENST00000391096 64 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 RNU2-43P-201ENST00000410306 190 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AL356387.2-201ENST00000422272 243 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AL158156.1-201ENST00000422509 473 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AC010265.1-201ENST00000513509 211 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 RNU6-377P-201ENST00000515965 102 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AC109810.1-201ENST00000534066 224 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA4P43681 MIR3646-201ENST00000578301 84 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 MIR5695-201ENST00000579717 85 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AC024153.1-201ENST00000603103 365 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AC008745.1-201ENST00000604064 271 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AC048347.1-201ENST00000624621 427 ntBASIC4.41□□□□□ -1.7
CHRNA4P43681 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA4P43681 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHRNA4P43681 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA4P43681 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA4P43681 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CHRNA4P43681 AF127577.6-201ENST00000623352 2191 ntBASIC4.4□□□□□ -1.7
CHRNA4P43681 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA4P43681 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA4P43681 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA4P43681 RNU5A-1-201ENST00000362698 116 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 RNU6-1286P-201ENST00000383871 107 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA4P43681 SSXP9-201ENST00000417503 292 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 BPY2DP-201ENST00000422208 265 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA4P43681 GEMIN8P3-201ENST00000445417 720 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms