Protein–RNA interactions for Protein: P40424

PBX1, Pre-B-cell leukemia transcription factor 1, humanhuman

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1P40424 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PBX1P40424 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PBX1P40424 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.28□□□□□ -1.88
PBX1P40424 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.27□□□□□ -1.89
PBX1P40424 ZNF519P1-201ENST00000449011 1626 ntBASIC3.27□□□□□ -1.89
PBX1P40424 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PBX1P40424 RNU6-562P-201ENST00000362731 107 ntBASIC3.27□□□□□ -1.89
PBX1P40424 RNU6-884P-201ENST00000363889 107 ntBASIC3.27□□□□□ -1.89
PBX1P40424 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PBX1P40424 MIR34A-201ENST00000385130 110 ntBASIC3.27□□□□□ -1.89
PBX1P40424 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PBX1P40424 AC096664.2-201ENST00000411843 406 ntBASIC3.27□□□□□ -1.89
PBX1P40424 NDUFS5P4-201ENST00000412983 318 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AC074085.1-201ENST00000413598 418 ntBASIC3.27□□□□□ -1.89
PBX1P40424 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.27□□□□□ -1.89
PBX1P40424 SKA2P1-201ENST00000425592 390 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.27□□□□□ -1.89
PBX1P40424 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 RPL37P4-201ENST00000448908 268 ntBASIC3.27□□□□□ -1.89
PBX1P40424 MTND1P17-201ENST00000448961 204 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AC107399.1-201ENST00000451226 265 ntBASIC3.27□□□□□ -1.89
PBX1P40424 SSXP4-201ENST00000451349 245 ntBASIC3.27□□□□□ -1.89
PBX1P40424 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.27□□□□□ -1.89
PBX1P40424 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 RPL39P5-202ENST00000512505 151 ntBASIC3.27□□□□□ -1.89
PBX1P40424 Y_RNA.675-201ENST00000516389 149 ntBASIC3.27□□□□□ -1.89
PBX1P40424 RNU6-1332P-201ENST00000516666 104 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.27□□□□□ -1.89
PBX1P40424 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.27□□□□□ -1.89
PBX1P40424 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PBX1P40424 COPS8P3-201ENST00000526024 482 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 AC007151.1-201ENST00000572774 483 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AL355375.2-201ENST00000574825 175 ntBASIC3.27□□□□□ -1.89
PBX1P40424 MIR4790-201ENST00000577799 79 ntBASIC3.27□□□□□ -1.89
PBX1P40424 MIR4782-201ENST00000577987 79 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AC138761.3-201ENST00000579993 334 ntBASIC3.27□□□□□ -1.89
PBX1P40424 MIR4795-201ENST00000584182 89 ntBASIC3.27□□□□□ -1.89
PBX1P40424 AC113139.1-201ENST00000605049 239 ntBASIC3.27□□□□□ -1.89
PBX1P40424 RNU6-85P-201ENST00000605989 107 ntBASIC3.27□□□□□ -1.89
PBX1P40424 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
PBX1P40424 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.27□□□□□ -1.89
PBX1P40424 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
PBX1P40424 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.26□□□□□ -1.89
PBX1P40424 AC093908.1-201ENST00000623125 8092 ntBASIC3.26□□□□□ -1.89
PBX1P40424 MTND5P7-201ENST00000413558 1798 ntBASIC3.26□□□□□ -1.89
PBX1P40424 Y_RNA.535-201ENST00000384612 99 ntBASIC3.26□□□□□ -1.89
PBX1P40424 MIR10A-201ENST00000385043 110 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AL356057.2-201ENST00000403318 432 ntBASIC3.26□□□□□ -1.89
PBX1P40424 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.26□□□□□ -1.89
PBX1P40424 AL096701.2-201ENST00000416920 238 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC099548.1-201ENST00000421443 426 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AL353729.1-201ENST00000425044 720 ntBASIC3.26□□□□□ -1.89
PBX1P40424 TOMM20P4-201ENST00000427861 435 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.26□□□□□ -1.89
PBX1P40424 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.26□□□□□ -1.89
PBX1P40424 AP005639.2-201ENST00000527592 928 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.26□□□□□ -1.89
PBX1P40424 AC025423.5-201ENST00000550230 219 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC026371.1-201ENST00000551867 419 ntBASIC3.26□□□□□ -1.89
PBX1P40424 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
PBX1P40424 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.26□□□□□ -1.89
PBX1P40424 AL670379.10-201ENST00000604330 253 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AP000787.2-201ENST00000604432 568 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AL670379.9-201ENST00000605428 253 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC068831.7-201ENST00000616954 363 ntBASIC3.26□□□□□ -1.89
PBX1P40424 AC073308.1-201ENST00000623696 305 ntBASIC3.26□□□□□ -1.89
PBX1P40424 Z69720.2-201ENST00000624755 279 ntBASIC3.26□□□□□ -1.89
PBX1P40424 SCARNA15.3-201ENST00000626315 122 ntBASIC3.26□□□□□ -1.89
PBX1P40424 SCARNA4.1-201ENST00000628597 123 ntBASIC3.26□□□□□ -1.89
PBX1P40424 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.26□□□□□ -1.89
PBX1P40424 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
PBX1P40424 AC138393.1-203ENST00000327086 343 ntBASIC3.25□□□□□ -1.89
PBX1P40424 RNU4-79P-201ENST00000362764 141 ntBASIC3.25□□□□□ -1.89
PBX1P40424 SNORA38.1-201ENST00000364172 131 ntBASIC3.25□□□□□ -1.89
PBX1P40424 Y_RNA.384-201ENST00000383909 102 ntBASIC3.25□□□□□ -1.89
PBX1P40424 Y_RNA.387-201ENST00000383918 102 ntBASIC3.25□□□□□ -1.89
PBX1P40424 RPL5P18-201ENST00000406671 891 ntBASIC3.25□□□□□ -1.89
PBX1P40424 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.25□□□□□ -1.89
PBX1P40424 RN7SKP158-201ENST00000410453 326 ntBASIC3.25□□□□□ -1.89
PBX1P40424 RNA5SP120-201ENST00000410900 112 ntBASIC3.25□□□□□ -1.89
PBX1P40424 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.25□□□□□ -1.89
PBX1P40424 UBE2V1P4-201ENST00000425374 344 ntBASIC3.25□□□□□ -1.89
PBX1P40424 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.25□□□□□ -1.89
PBX1P40424 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.25□□□□□ -1.89
PBX1P40424 AC117440.1-201ENST00000474107 571 ntBASIC3.25□□□□□ -1.89
PBX1P40424 MTND5P5-201ENST00000503764 376 ntBASIC3.25□□□□□ -1.89
PBX1P40424 RNU6-1183P-201ENST00000517054 60 ntBASIC3.25□□□□□ -1.89
PBX1P40424 AP005597.4-201ENST00000526762 229 ntBASIC3.25□□□□□ -1.89
PBX1P40424 AC093027.1-201ENST00000546698 429 ntBASIC3.25□□□□□ -1.89
PBX1P40424 NACAP3-201ENST00000552100 481 ntBASIC3.25□□□□□ -1.89
PBX1P40424 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
PBX1P40424 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.25□□□□□ -1.89
PBX1P40424 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms