Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNU2-69P-201ENST00000516061 100 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 RNA5SP148-201ENST00000516527 94 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.48□□□□□ -1.85
COL15A1P39059 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.48□□□□□ -1.85
COL15A1P39059 VN1R80P-201ENST00000597126 338 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 DUSP12P1-201ENST00000612874 516 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 AC092608.2-201ENST00000624427 218 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 MTND5P19-201ENST00000424872 1794 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 CUL1P1-201ENST00000509510 2425 ntBASIC3.48□□□□□ -1.85
COL15A1P39059 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.48□□□□□ -1.85
COL15A1P39059 MTND4P29-201ENST00000503122 1372 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
COL15A1P39059 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL15A1P39059 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL15A1P39059 Y_RNA.166-201ENST00000363730 102 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 Y_RNA.263-201ENST00000364659 114 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 SNORD81.2-201ENST00000365153 76 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 RNU6-1013P-201ENST00000384180 107 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 EIF4E2P1-201ENST00000393781 255 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 RNU6-1148P-201ENST00000410992 104 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AL669831.1-202ENST00000428504 417 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 GTF2IP13-201ENST00000438487 386 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 MTND4LP16-201ENST00000440828 295 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 CECR9-201ENST00000453421 199 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 RNU7-167P-201ENST00000459160 62 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.47□□□□□ -1.85
COL15A1P39059 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 HMGN2P13-201ENST00000476476 274 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC090525.1-201ENST00000479116 478 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 RPL21P93-201ENST00000480465 489 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.47□□□□□ -1.85
COL15A1P39059 SUMO2P6-201ENST00000505273 288 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.47□□□□□ -1.85
COL15A1P39059 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.47□□□□□ -1.85
COL15A1P39059 MTND3P22-201ENST00000510932 243 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC112206.3-201ENST00000514578 389 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 RNU6-711P-201ENST00000517255 106 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.47□□□□□ -1.85
COL15A1P39059 AL157871.3-201ENST00000557231 293 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 MIR1273C-201ENST00000578669 77 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.47□□□□□ -1.85
COL15A1P39059 AC005261.5-201ENST00000596280 355 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC012119.1-201ENST00000603184 222 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 uc_338.5-201ENST00000611839 155 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 AC022418.1-201ENST00000624118 445 ntBASIC3.47□□□□□ -1.85
COL15A1P39059 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL15A1P39059 AC002546.1-201ENST00000588041 2504 ntBASIC3.46□□□□□ -1.85
COL15A1P39059 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
COL15A1P39059 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL15A1P39059 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL15A1P39059 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.46□□□□□ -1.86
COL15A1P39059 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
COL15A1P39059 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL15A1P39059 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL15A1P39059 Y_RNA.33-201ENST00000362591 102 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 SNORD113-7-201ENST00000363762 77 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 RNU6-395P-201ENST00000365662 106 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL15A1P39059 Y_RNA.399-201ENST00000383955 105 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 Y_RNA.414-201ENST00000384011 101 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 SNORA70B-201ENST00000384210 135 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 RNU6-1179P-201ENST00000384667 107 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 MIR887-201ENST00000401258 79 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 HSPE1P1-201ENST00000421494 318 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.46□□□□□ -1.86
COL15A1P39059 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.46□□□□□ -1.86
COL15A1P39059 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.46□□□□□ -1.86
COL15A1P39059 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.46□□□□□ -1.86
COL15A1P39059 AC008413.1-201ENST00000511864 177 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 SNORA19.2-201ENST00000516013 114 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.46□□□□□ -1.86
COL15A1P39059 MIR4742-201ENST00000581069 85 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 MIR3941-201ENST00000582572 103 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 BNIP3P25-201ENST00000596023 559 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 CTHRC1P1-201ENST00000605383 469 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.46□□□□□ -1.86
COL15A1P39059 AC103705.1-201ENST00000619013 241 ntBASIC3.46□□□□□ -1.86
COL15A1P39059 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.46□□□□□ -1.86
COL15A1P39059 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL15A1P39059 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
COL15A1P39059 AC121333.1-201ENST00000567488 2709 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 AC073544.1-201ENST00000600110 1595 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 AC090740.1-201ENST00000623193 2262 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 RNU6-1252P-201ENST00000363054 104 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 RNU6-371P-201ENST00000364283 108 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.45□□□□□ -1.86
COL15A1P39059 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.45□□□□□ -1.86
COL15A1P39059 RNU6-831P-201ENST00000384548 107 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 MIR578-201ENST00000384828 96 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 RNU6-1025P-201ENST00000410629 104 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 PDCL2P1-201ENST00000419302 352 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 NDUFA5P4-201ENST00000436704 385 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 FABP5P15-201ENST00000453566 214 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 RNU6-329P-201ENST00000459618 107 ntBASIC3.45□□□□□ -1.86
COL15A1P39059 AC009901.1-201ENST00000506703 541 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms