Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHMT2P34897 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SHMT2P34897 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SHMT2P34897 U6atac.2-201ENST00000408644 118 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 RNU6-248P-201ENST00000410720 107 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 Y_RNA.623-201ENST00000411128 95 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 MTND3P17-201ENST00000416968 344 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AL365338.1-201ENST00000422282 858 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 BX276092.3-201ENST00000424182 230 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.99□□□□□ -2.09
SHMT2P34897 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHMT2P34897 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.99□□□□□ -2.09
SHMT2P34897 AL136380.1-201ENST00000447970 162 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 AC090515.1-201ENST00000465295 476 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 RBBP4P6-201ENST00000508098 202 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
SHMT2P34897 SMURF2P1-201ENST00000514992 481 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.99□□□□□ -2.09
SHMT2P34897 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 MIR3682-201ENST00000581338 84 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 MIR548AC-201ENST00000585049 88 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AC008521.1-201ENST00000587471 187 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 Z94722.1-201ENST00000604328 474 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AC068276.1-201ENST00000605793 379 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.99□□□□□ -2.09
SHMT2P34897 AP001506.1-201ENST00000615444 211 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 AC019226.2-201ENST00000625973 424 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHMT2P34897 RNY1P12-201ENST00000364251 105 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RNU4-91P-201ENST00000364778 135 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RNA5SP125-201ENST00000364843 120 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RNY3P10-201ENST00000384764 102 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 MIR578-201ENST00000384828 96 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 FTH1P15-201ENST00000406984 280 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 U3.40-201ENST00000408706 208 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC003685.2-201ENST00000422795 395 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.98□□□□□ -2.09
SHMT2P34897 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL353706.1-201ENST00000436728 494 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 GPM6BP3-201ENST00000442797 145 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL360271.2-201ENST00000447710 161 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RPS27AP8-201ENST00000452665 445 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL033528.1-201ENST00000453780 140 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RNA5SP269-201ENST00000459032 137 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 snoU109.1-201ENST00000459339 135 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RPL7P43-201ENST00000478876 753 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC018437.1-201ENST00000492214 406 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.98□□□□□ -2.09
SHMT2P34897 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.98□□□□□ -2.09
SHMT2P34897 SNORA25.11-201ENST00000515935 105 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.98□□□□□ -2.09
SHMT2P34897 AP003072.2-201ENST00000527756 676 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RANP3-201ENST00000530970 276 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC135279.1-201ENST00000543493 504 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.98□□□□□ -2.09
SHMT2P34897 AC092325.1-201ENST00000566449 554 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL670379.10-201ENST00000604330 253 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AL670379.9-201ENST00000605428 253 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC087045.1-201ENST00000605856 382 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC005332.10-201ENST00000612725 619 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC138649.3-201ENST00000622154 254 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC093648.1-201ENST00000623546 606 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 AC244517.12-201ENST00000623581 663 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.98□□□□□ -2.09
SHMT2P34897 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SHMT2P34897 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SHMT2P34897 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SHMT2P34897 FARSBP1-201ENST00000435808 1778 ntBASIC1.98□□□□□ -2.09
SHMT2P34897 RNU6-179P-201ENST00000363350 107 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 Y_RNA.367-201ENST00000365544 101 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 RNU4-26P-201ENST00000410270 107 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.97□□□□□ -2.09
SHMT2P34897 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.97□□□□□ -2.09
SHMT2P34897 CYCSP48-201ENST00000417124 323 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC009518.2-201ENST00000418056 731 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL353621.1-201ENST00000418219 243 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.97□□□□□ -2.09
SHMT2P34897 RPS3AP44-201ENST00000425466 790 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 ISCA1P6-201ENST00000427740 390 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 RPL31P35-201ENST00000431058 377 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL627311.1-201ENST00000431514 115 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.97□□□□□ -2.09
SHMT2P34897 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.97□□□□□ -2.09
SHMT2P34897 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.97□□□□□ -2.09
SHMT2P34897 NDUFB1P2-201ENST00000449477 176 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 RNA5SP233-201ENST00000459153 113 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC116562.3-201ENST00000506136 177 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC008526.1-201ENST00000509149 338 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 AC117522.2-201ENST00000510049 657 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
SHMT2P34897 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms