Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU1-73P-201ENST00000383971 164 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 RNU6-483P-201ENST00000384088 108 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 RNU6-14P-201ENST00000384630 106 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 MIR34A-201ENST00000385130 110 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 RNU4-55P-201ENST00000410731 137 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC13P31276 BX295541.1-201ENST00000417774 250 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC13P31276 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC13P31276 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC13P31276 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AC022364.2-201ENST00000457963 554 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC13P31276 AC107626.1-201ENST00000471084 183 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXC13P31276 AC008413.1-201ENST00000511864 177 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 SNORD19.2-201ENST00000516978 73 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 RNU1-104P-201ENST00000517280 175 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC13P31276 AC093027.1-201ENST00000546698 429 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC13P31276 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC13P31276 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC13P31276 AC009163.5-201ENST00000575421 637 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC13P31276 AC112191.3-201ENST00000604371 277 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AL359198.2-201ENST00000611836 194 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 AC136475.10-201ENST00000620253 385 ntBASIC2.92□□□□□ -1.94
HOXC13P31276 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HOXC13P31276 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC13P31276 Y_RNA.58-201ENST00000362807 102 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 SNORD56.2-201ENST00000363242 71 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 RNU6-778P-201ENST00000363269 103 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 Y_RNA.154-201ENST00000363624 102 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 Y_RNA.279-201ENST00000364763 95 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 RNY3P1-201ENST00000365085 102 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 RNY3-201ENST00000365484 102 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 Y_RNA.419-201ENST00000384041 102 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 Y_RNA.490-201ENST00000384413 102 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HOXC13P31276 RNU6-817P-201ENST00000391083 104 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AL360182.1-201ENST00000397433 468 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 Y_RNA.598-201ENST00000410480 95 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 RPS12P24-201ENST00000412619 387 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AL513185.2-201ENST00000425543 193 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 TIMM9P3-201ENST00000428659 274 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC13P31276 RPS29P25-201ENST00000481709 171 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AC010587.1-201ENST00000505809 469 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC13P31276 AC098591.2-201ENST00000510152 315 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 SCARNA17.1-201ENST00000516211 143 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 RNU6-327P-201ENST00000516270 127 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 SCARNA17.2-201ENST00000516334 143 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 RNU6-1092P-201ENST00000516955 87 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 MTCO2P4-201ENST00000517968 247 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AP003181.2-201ENST00000528941 181 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AL512360.1-201ENST00000555346 234 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AL121821.2-201ENST00000556081 394 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AC027176.1-201ENST00000560204 514 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AL360085.1-201ENST00000604713 532 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 BNIP3P10-201ENST00000605360 577 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 SCARNA17.4-201ENST00000614296 143 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 AP001506.1-201ENST00000615444 211 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 U2.21-201ENST00000637295 81 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 MTND5P42-201ENST00000637720 498 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 MIR1321-201ENST00000637766 79 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.91□□□□□ -1.94
HOXC13P31276 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HOXC13P31276 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC13P31276 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC13P31276 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXC13P31276 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
HOXC13P31276 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HOXC13P31276 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC13P31276 RNU4-79P-201ENST00000362764 141 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 Y_RNA.86-201ENST00000363020 111 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 RNU6-960P-201ENST00000364056 120 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 MIR196B-201ENST00000384852 84 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 MIR524-201ENST00000385242 87 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC080125.1-201ENST00000414888 684 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC009963.1-201ENST00000417265 157 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 SKA2P1-201ENST00000425592 390 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 ARL5AP4-201ENST00000430731 512 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AL121890.1-201ENST00000435457 205 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 HMGB3P12-201ENST00000438745 556 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC010095.1-201ENST00000443543 144 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC13P31276 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC13P31276 RNU7-26P-201ENST00000458980 63 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 RPS27AP10-201ENST00000496103 208 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC13P31276 RNU6-1045P-201ENST00000516321 107 ntBASIC2.9□□□□□ -1.95
HOXC13P31276 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC13P31276 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC13P31276 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC13P31276 AL157687.1-201ENST00000554853 619 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms