Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.84□□□□□ -1.8
PTPN1P18031 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTPN1P18031 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PTPN1P18031 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTPN1P18031 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PTPN1P18031 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN1P18031 AC006504.1-201ENST00000562493 3666 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 RNU6-238P-201ENST00000363313 106 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 RNU5E-7P-201ENST00000365290 117 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 SNORD14.1-201ENST00000365609 90 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 Y_RNA.380-201ENST00000365663 111 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN1P18031 MIR625-201ENST00000385047 85 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN1P18031 AL512844.2-201ENST00000433990 593 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 NDUFB4P6-201ENST00000436819 366 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN1P18031 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN1P18031 CHEK2P4-201ENST00000450340 246 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC114801.2-201ENST00000503825 781 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 MRPS35P2-201ENST00000508242 191 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 SNORA40.14-201ENST00000516543 86 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 IGKV2D-19-201ENST00000523346 262 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC110588.1-201ENST00000559699 137 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN1P18031 MIR3922-201ENST00000585192 84 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC016727.2-201ENST00000603988 621 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AL355297.3-201ENST00000604082 446 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 Z98751.3-201ENST00000604447 521 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC124312.5-201ENST00000604451 268 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 AC006077.1-201ENST00000604746 343 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 HMGB1P24-202ENST00000615653 685 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN1P18031 AC027309.3-201ENST00000623419 351 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN1P18031 MTND5P9-201ENST00000503854 1755 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 ZNF299P-201ENST00000406845 1804 ntBASIC3.83□□□□□ -1.8
PTPN1P18031 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN1P18031 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
PTPN1P18031 RNU6-428P-201ENST00000362942 107 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 Y_RNA.106-201ENST00000363189 100 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PTPN1P18031 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN1P18031 RPS29P4-201ENST00000414733 161 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 CYCSP4-201ENST00000429682 331 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 HMGN2P31-201ENST00000432430 273 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 HIGD1AP2-201ENST00000446367 280 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 snoU109.2-201ENST00000459316 135 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 AC010655.3-201ENST00000478818 450 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN1P18031 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN1P18031 RNU6-377P-201ENST00000515965 102 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 SNORA70.18-201ENST00000516696 98 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 RNA5SP468-201ENST00000516782 93 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 RNU6-612P-201ENST00000516909 102 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN1P18031 AP004242.1-201ENST00000533701 349 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.82□□□□□ -1.8
PTPN1P18031 AC004584.2-201ENST00000570407 410 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 MIR4782-201ENST00000577987 79 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 MIR5188-201ENST00000583467 113 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN1P18031 KLKP1-201ENST00000595979 403 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 SRGNP1-201ENST00000603392 451 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN1P18031 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN1P18031 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN1P18031 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN1P18031 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
PTPN1P18031 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PTPN1P18031 MTND5P27-201ENST00000428871 1720 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN1P18031 Y_RNA.152-201ENST00000363578 100 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 RNY3P11-201ENST00000364153 102 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 U3.42-201ENST00000408746 214 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 RNA5SP129-201ENST00000410276 118 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 Y_RNA.618-201ENST00000410949 107 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN1P18031 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN1P18031 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN1P18031 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN1P18031 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN1P18031 AC005476.1-201ENST00000554427 397 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 ZNF192P1-203ENST00000565888 810 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 MIR5696-201ENST00000578474 85 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 MIR3690-201ENST00000580266 75 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN1P18031 AC024220.1-201ENST00000603675 484 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 AC005046.1-201ENST00000608515 625 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 AC006023.2-201ENST00000609916 167 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 AL021879.1-201ENST00000611756 288 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 MIR1244-1-201ENST00000612829 85 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 SCARNA4-202ENST00000625402 129 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 MIR1244-3-201ENST00000635744 85 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 MIR1244-2-201ENST00000636449 85 ntBASIC3.81□□□□□ -1.8
PTPN1P18031 MIR1244-4-202ENST00000636813 85 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms