Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TMEM167AP1-201ENST00000423409 219 ntBASIC3.09□□□□□ -1.91
MMP3P08254 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP3P08254 ZNF863P-201ENST00000426746 417 ntBASIC3.09□□□□□ -1.91
MMP3P08254 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MMP3P08254 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.09□□□□□ -1.91
MMP3P08254 SNRPEP9-201ENST00000436794 238 ntBASIC3.09□□□□□ -1.91
MMP3P08254 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
MMP3P08254 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.09□□□□□ -1.91
MMP3P08254 PPP1R2P5-201ENST00000457256 603 ntBASIC3.09□□□□□ -1.91
MMP3P08254 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP3P08254 RNU7-167P-201ENST00000459160 62 ntBASIC3.09□□□□□ -1.91
MMP3P08254 RPL7P43-201ENST00000478876 753 ntBASIC3.09□□□□□ -1.91
MMP3P08254 AC006445.2-201ENST00000510061 472 ntBASIC3.09□□□□□ -1.91
MMP3P08254 SNORA19.2-201ENST00000516013 114 ntBASIC3.09□□□□□ -1.91
MMP3P08254 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP3P08254 AC025755.1-201ENST00000521306 278 ntBASIC3.09□□□□□ -1.91
MMP3P08254 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.09□□□□□ -1.91
MMP3P08254 MIR1273C-201ENST00000578669 77 ntBASIC3.09□□□□□ -1.91
MMP3P08254 AC005498.1-201ENST00000592125 465 ntBASIC3.09□□□□□ -1.91
MMP3P08254 AC008962.1-201ENST00000605729 304 ntBASIC3.09□□□□□ -1.91
MMP3P08254 AC103705.1-201ENST00000619013 241 ntBASIC3.09□□□□□ -1.91
MMP3P08254 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MMP3P08254 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.09□□□□□ -1.92
MMP3P08254 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MMP3P08254 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.08□□□□□ -1.92
MMP3P08254 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MMP3P08254 AC092593.1-201ENST00000515413 1815 ntBASIC3.08□□□□□ -1.92
MMP3P08254 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
MMP3P08254 Y_RNA.100-201ENST00000363141 102 ntBASIC3.08□□□□□ -1.92
MMP3P08254 RNU6-266P-201ENST00000364225 107 ntBASIC3.08□□□□□ -1.92
MMP3P08254 Y_RNA.414-201ENST00000384011 101 ntBASIC3.08□□□□□ -1.92
MMP3P08254 Y_RNA.529-201ENST00000384586 119 ntBASIC3.08□□□□□ -1.92
MMP3P08254 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MMP3P08254 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MMP3P08254 SAR1AP2-201ENST00000392696 594 ntBASIC3.08□□□□□ -1.92
MMP3P08254 MIR1261-201ENST00000408659 82 ntBASIC3.08□□□□□ -1.92
MMP3P08254 RNU2-68P-201ENST00000410878 191 ntBASIC3.08□□□□□ -1.92
MMP3P08254 MTND3P8-201ENST00000412909 339 ntBASIC3.08□□□□□ -1.92
MMP3P08254 RPLP0P7-201ENST00000416050 667 ntBASIC3.08□□□□□ -1.92
MMP3P08254 HSPE1P1-201ENST00000421494 318 ntBASIC3.08□□□□□ -1.92
MMP3P08254 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.08□□□□□ -1.92
MMP3P08254 MTCO3P46-201ENST00000425787 232 ntBASIC3.08□□□□□ -1.92
MMP3P08254 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.08□□□□□ -1.92
MMP3P08254 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.08□□□□□ -1.92
MMP3P08254 AC093019.1-201ENST00000443135 252 ntBASIC3.08□□□□□ -1.92
MMP3P08254 AL583843.1-201ENST00000456070 346 ntBASIC3.08□□□□□ -1.92
MMP3P08254 RNU6-329P-201ENST00000459618 107 ntBASIC3.08□□□□□ -1.92
MMP3P08254 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.08□□□□□ -1.92
MMP3P08254 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.08□□□□□ -1.92
MMP3P08254 AC104136.1-201ENST00000512969 394 ntBASIC3.08□□□□□ -1.92
MMP3P08254 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
MMP3P08254 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.08□□□□□ -1.92
MMP3P08254 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.08□□□□□ -1.92
MMP3P08254 TRAV37-201ENST00000553906 342 ntBASIC3.08□□□□□ -1.92
MMP3P08254 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.08□□□□□ -1.92
MMP3P08254 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
MMP3P08254 MIR5692A1-201ENST00000580523 69 ntBASIC3.08□□□□□ -1.92
MMP3P08254 AL133393.1-201ENST00000603277 287 ntBASIC3.08□□□□□ -1.92
MMP3P08254 AL359757.2-201ENST00000624309 274 ntBASIC3.08□□□□□ -1.92
MMP3P08254 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MMP3P08254 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.08□□□□□ -1.92
MMP3P08254 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MMP3P08254 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MMP3P08254 AC138393.1-203ENST00000327086 343 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RNU6-82P-201ENST00000363970 107 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RNU6-270P-201ENST00000364131 105 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RNU6-395P-201ENST00000365662 106 ntBASIC3.07□□□□□ -1.92
MMP3P08254 Y_RNA.399-201ENST00000383955 105 ntBASIC3.07□□□□□ -1.92
MMP3P08254 Y_RNA.530-201ENST00000384587 101 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RPS4XP3-201ENST00000398541 413 ntBASIC3.07□□□□□ -1.92
MMP3P08254 FAT1P1-201ENST00000406588 507 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RAP1BP3-201ENST00000407180 549 ntBASIC3.07□□□□□ -1.92
MMP3P08254 USP9YP20-201ENST00000419224 558 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC092047.1-201ENST00000424997 240 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC007560.1-201ENST00000426912 237 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.07□□□□□ -1.92
MMP3P08254 MYL8P-204ENST00000431574 518 ntBASIC3.07□□□□□ -1.92
MMP3P08254 MTND3P23-201ENST00000431980 347 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.07□□□□□ -1.92
MMP3P08254 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.07□□□□□ -1.92
MMP3P08254 AL513043.1-201ENST00000439124 535 ntBASIC3.07□□□□□ -1.92
MMP3P08254 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.07□□□□□ -1.92
MMP3P08254 AC092001.1-201ENST00000453012 261 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC104472.2-201ENST00000469035 601 ntBASIC3.07□□□□□ -1.92
MMP3P08254 MTND4P17-201ENST00000470444 350 ntBASIC3.07□□□□□ -1.92
MMP3P08254 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.07□□□□□ -1.92
MMP3P08254 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.07□□□□□ -1.92
MMP3P08254 SNORA14.1-201ENST00000516113 141 ntBASIC3.07□□□□□ -1.92
MMP3P08254 SNORA31.19-201ENST00000517079 126 ntBASIC3.07□□□□□ -1.92
MMP3P08254 SNORA31.21-201ENST00000517180 77 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RN7SKP256-201ENST00000517201 314 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.07□□□□□ -1.92
MMP3P08254 HPRT1P3-201ENST00000539521 576 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.07□□□□□ -1.92
MMP3P08254 AC091544.4-201ENST00000555268 342 ntBASIC3.07□□□□□ -1.92
MMP3P08254 FGF7P1-201ENST00000582820 288 ntBASIC3.07□□□□□ -1.92
MMP3P08254 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.07□□□□□ -1.92
MMP3P08254 MIR5692C1-201ENST00000585309 91 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC007938.3-201ENST00000604965 623 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC025253.1-201ENST00000613623 543 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms