Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AP000797.1-201ENST00000478870 387 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 RPL36AP48-201ENST00000485521 314 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 HMGB3P17-201ENST00000504195 649 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF4O95639 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 RNU6-1129P-201ENST00000515964 104 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 EEF1A1P37-201ENST00000522748 715 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 AL133241.1-201ENST00000556832 487 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC009094.1-201ENST00000564443 426 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC025678.1-201ENST00000567861 338 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 HMGN1P30-201ENST00000589286 268 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AL359999.1-201ENST00000604513 294 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC138749.5-201ENST00000611461 208 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC004223.4-201ENST00000612426 332 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC116165.2-201ENST00000616705 206 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 AC138627.2-201ENST00000624202 601 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF4O95639 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CPSF4O95639 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CPSF4O95639 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
CPSF4O95639 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF4O95639 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CPSF4O95639 RNU1-72P-201ENST00000362976 153 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 RNU5F-7P-201ENST00000363696 115 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 RNU5E-5P-201ENST00000365379 116 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 MIR676-201ENST00000390702 67 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC016831.2-201ENST00000417179 352 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 RPL31P63-201ENST00000422565 375 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF4O95639 AC119618.1-201ENST00000434191 222 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF4O95639 AC112771.1-201ENST00000463581 102 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 RPL22P13-201ENST00000493291 347 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC008526.1-201ENST00000509149 338 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 AF213884.2-201ENST00000510417 903 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 MRPS33P3-201ENST00000513456 322 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 ZNF321P-202ENST00000550843 495 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4O95639 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF4O95639 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC007229.1-201ENST00000590455 412 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AP001486.3-201ENST00000615334 372 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC009233.1-201ENST00000616477 371 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC009878.1-201ENST00000621819 340 ntBASIC1.4□□□□□ -2.19
CPSF4O95639 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF4O95639 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
CPSF4O95639 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF4O95639 AC073343.1-201ENST00000328239 651 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 RNU5E-1-201ENST00000362477 120 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 RNU6-395P-201ENST00000365662 106 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF4O95639 MRPL42P2-201ENST00000403169 426 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 FTH1P15-201ENST00000406984 280 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC114491.1-201ENST00000416095 246 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 MTND2P9-201ENST00000422293 931 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL356583.2-201ENST00000426536 280 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.39□□□□□ -2.19
CPSF4O95639 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF4O95639 AC124916.1-201ENST00000444020 547 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC007677.1-201ENST00000445757 515 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL360221.1-201ENST00000445989 335 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 USP9YP12-201ENST00000450481 570 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC003071.1-201ENST00000451219 789 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AL583843.1-201ENST00000456070 346 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC055731.1-201ENST00000474387 401 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.39□□□□□ -2.19
CPSF4O95639 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF4O95639 AC005178.1-201ENST00000508392 440 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.39□□□□□ -2.19
CPSF4O95639 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF4O95639 AC135279.1-201ENST00000543493 504 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 AC079598.5-201ENST00000547460 117 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4O95639 AC015720.1-201ENST00000565251 277 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 DEFB122-202ENST00000569013 197 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 MIR4287-201ENST00000579398 78 ntBASIC1.39□□□□□ -2.19
CPSF4O95639 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF4O95639 AC090616.2-202ENST00000584248 222 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms