Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC244517.12-201ENST00000623581 663 ntBASIC3.01□□□□□ -1.93
MBD4O95243 MIR3529-201ENST00000637713 78 ntBASIC3.01□□□□□ -1.93
MBD4O95243 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.01□□□□□ -1.93
MBD4O95243 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
MBD4O95243 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
MBD4O95243 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3□□□□□ -1.93
MBD4O95243 AL139276.1-201ENST00000311910 1001 ntBASIC3□□□□□ -1.93
MBD4O95243 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MBD4O95243 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
MBD4O95243 RNU4-55P-201ENST00000410731 137 ntBASIC3□□□□□ -1.93
MBD4O95243 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3□□□□□ -1.93
MBD4O95243 EEF1B2P7-201ENST00000451177 676 ntBASIC3□□□□□ -1.93
MBD4O95243 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3□□□□□ -1.93
MBD4O95243 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3□□□□□ -1.93
MBD4O95243 MTND3P25-201ENST00000509243 135 ntBASIC3□□□□□ -1.93
MBD4O95243 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3□□□□□ -1.93
MBD4O95243 Y_RNA.687-201ENST00000516558 91 ntBASIC3□□□□□ -1.93
MBD4O95243 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3□□□□□ -1.93
MBD4O95243 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3□□□□□ -1.93
MBD4O95243 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 AC069294.1-201ENST00000608397 350 ntBASIC3□□□□□ -1.93
MBD4O95243 AP001596.2-201ENST00000608410 312 ntBASIC3□□□□□ -1.93
MBD4O95243 AC096772.1-201ENST00000609146 564 ntBASIC3□□□□□ -1.93
MBD4O95243 AC104073.3-201ENST00000610942 955 ntBASIC3□□□□□ -1.93
MBD4O95243 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3□□□□□ -1.93
MBD4O95243 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
MBD4O95243 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3□□□□□ -1.93
MBD4O95243 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3□□□□□ -1.93
MBD4O95243 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3□□□□□ -1.93
MBD4O95243 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
MBD4O95243 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3□□□□□ -1.93
MBD4O95243 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MBD4O95243 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
MBD4O95243 RNU6-942P-201ENST00000363002 107 ntBASIC2.99□□□□□ -1.93
MBD4O95243 RNU6-517P-201ENST00000384362 110 ntBASIC2.99□□□□□ -1.93
MBD4O95243 Y_RNA.559-201ENST00000384686 107 ntBASIC2.99□□□□□ -1.93
MBD4O95243 MIR218-1-201ENST00000384999 110 ntBASIC2.99□□□□□ -1.93
MBD4O95243 U6atac.2-201ENST00000408644 118 ntBASIC2.99□□□□□ -1.93
MBD4O95243 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.99□□□□□ -1.93
MBD4O95243 AL365400.1-201ENST00000431854 640 ntBASIC2.99□□□□□ -1.93
MBD4O95243 AL118520.1-201ENST00000450770 291 ntBASIC2.99□□□□□ -1.93
MBD4O95243 AL122001.1-201ENST00000457027 370 ntBASIC2.99□□□□□ -1.93
MBD4O95243 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.99□□□□□ -1.93
MBD4O95243 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
MBD4O95243 AC105245.1-201ENST00000581934 244 ntBASIC2.99□□□□□ -1.93
MBD4O95243 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.99□□□□□ -1.93
MBD4O95243 AC023043.3-201ENST00000593113 385 ntBASIC2.99□□□□□ -1.93
MBD4O95243 Z99129.1-201ENST00000612510 255 ntBASIC2.99□□□□□ -1.93
MBD4O95243 AC026585.1-201ENST00000619582 524 ntBASIC2.99□□□□□ -1.93
MBD4O95243 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
MBD4O95243 Z75746.1-201ENST00000440243 2080 ntBASIC2.99□□□□□ -1.93
MBD4O95243 MTND4P14-201ENST00000435799 1354 ntBASIC2.99□□□□□ -1.93
MBD4O95243 MTND5P26-201ENST00000426018 1752 ntBASIC2.98□□□□□ -1.93
MBD4O95243 RNU4-24P-201ENST00000364565 139 ntBASIC2.98□□□□□ -1.93
MBD4O95243 RNU6-259P-201ENST00000383999 107 ntBASIC2.98□□□□□ -1.93
MBD4O95243 SNORA67.4-201ENST00000384688 142 ntBASIC2.98□□□□□ -1.93
MBD4O95243 RNU6-220P-201ENST00000390919 107 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AL139095.1-201ENST00000404326 391 ntBASIC2.98□□□□□ -1.93
MBD4O95243 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.98□□□□□ -1.93
MBD4O95243 RNU2-66P-201ENST00000410650 161 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.98□□□□□ -1.93
MBD4O95243 PGBD4P6-201ENST00000421501 610 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.98□□□□□ -1.93
MBD4O95243 AL669831.1-202ENST00000428504 417 ntBASIC2.98□□□□□ -1.93
MBD4O95243 RPL30P4-201ENST00000429309 333 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.98□□□□□ -1.93
MBD4O95243 GTF2IP13-201ENST00000438487 386 ntBASIC2.98□□□□□ -1.93
MBD4O95243 CALM1P1-201ENST00000442082 433 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.98□□□□□ -1.93
MBD4O95243 SNRPFP3-201ENST00000457792 225 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AC079140.5-201ENST00000507882 310 ntBASIC2.98□□□□□ -1.93
MBD4O95243 MTCO3P7-201ENST00000510008 774 ntBASIC2.98□□□□□ -1.93
MBD4O95243 RN7SKP219-201ENST00000516825 296 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AP003034.1-201ENST00000534621 422 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AC010186.2-204ENST00000537668 439 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AC079598.5-201ENST00000547460 117 ntBASIC2.98□□□□□ -1.93
MBD4O95243 CR383656.8-201ENST00000549046 145 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AC023824.2-201ENST00000566185 400 ntBASIC2.98□□□□□ -1.93
MBD4O95243 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.98□□□□□ -1.93
MBD4O95243 AC012507.3-201ENST00000603556 477 ntBASIC2.98□□□□□ -1.93
MBD4O95243 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.98□□□□□ -1.93
MBD4O95243 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.98□□□□□ -1.93
MBD4O95243 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
MBD4O95243 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.98□□□□□ -1.93
MBD4O95243 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MBD4O95243 VTRNA1-1-201ENST00000363120 99 ntBASIC2.97□□□□□ -1.93
MBD4O95243 Y_RNA.194-201ENST00000363985 102 ntBASIC2.97□□□□□ -1.93
MBD4O95243 RNU6-487P-201ENST00000365430 104 ntBASIC2.97□□□□□ -1.93
MBD4O95243 OR5H15-201ENST00000383696 930 ntBASIC2.97□□□□□ -1.93
MBD4O95243 RNU6-434P-201ENST00000384376 107 ntBASIC2.97□□□□□ -1.93
MBD4O95243 RNU6-393P-201ENST00000384475 107 ntBASIC2.97□□□□□ -1.93
MBD4O95243 RNU2-3P-201ENST00000410144 191 ntBASIC2.97□□□□□ -1.93
MBD4O95243 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.97□□□□□ -1.93
MBD4O95243 AL096701.2-201ENST00000416920 238 ntBASIC2.97□□□□□ -1.93
MBD4O95243 AC097463.2-201ENST00000421074 142 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms