Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SCARNA17.4-201ENST00000614296 143 ntBASIC2.77□□□□□ -1.97
NKX2-2O95096 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.77□□□□□ -1.97
NKX2-2O95096 U4.7-201ENST00000638126 106 ntBASIC2.77□□□□□ -1.97
NKX2-2O95096 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NKX2-2O95096 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX2-2O95096 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-2O95096 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-2O95096 SNORD46.1-201ENST00000364139 104 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 SNORA68.1-201ENST00000364537 132 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-2O95096 Y_RNA.530-201ENST00000384587 101 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MIR147B-201ENST00000390185 80 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AL513475.1-201ENST00000406602 315 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 HMGB1P31-201ENST00000437242 427 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MTCO3P18-201ENST00000440206 761 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-2O95096 AC013470.1-201ENST00000453438 462 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 RNU7-66P-201ENST00000459469 62 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MTCYBP40-201ENST00000509390 1135 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 FAM206BP-201ENST00000510179 541 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 RNU5B-3P-201ENST00000516601 115 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AC109479.2-201ENST00000517842 174 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 BTF3P12-201ENST00000519620 469 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AC087854.1-201ENST00000519706 414 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-2O95096 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.76□□□□□ -1.97
NKX2-2O95096 RNU6-91P-201ENST00000607774 107 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AL121757.2-201ENST00000611223 313 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AC096577.2-201ENST00000611455 153 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
NKX2-2O95096 ATP5A1P2-202ENST00000616464 443 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MIR8057-201ENST00000620957 69 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 AC090617.10-201ENST00000624308 134 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MIR3651-201ENST00000630427 90 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 MIR3529-201ENST00000637713 78 ntBASIC2.76□□□□□ -1.97
NKX2-2O95096 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-2O95096 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
NKX2-2O95096 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
NKX2-2O95096 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.76□□□□□ -1.97
NKX2-2O95096 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-2O95096 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-2O95096 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 RNU6-1283P-201ENST00000365314 105 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RNU6-487P-201ENST00000365430 104 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RNU6-1083P-201ENST00000384022 107 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RNU6-843P-201ENST00000384454 104 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 FGF7P8-201ENST00000402994 292 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RPL30P16-201ENST00000419341 429 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-2O95096 AL365400.1-201ENST00000431854 640 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 NDUFA5P4-201ENST00000436704 385 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.75□□□□□ -1.97
NKX2-2O95096 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.75□□□□□ -1.97
NKX2-2O95096 AL441985.1-201ENST00000457727 251 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 AC007547.1-201ENST00000462177 490 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RPL27AP5-201ENST00000469428 449 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
NKX2-2O95096 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.75□□□□□ -1.97
NKX2-2O95096 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.75□□□□□ -1.97
NKX2-2O95096 SNORA31.6-201ENST00000516241 130 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-2O95096 AL133241.1-201ENST00000556832 487 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-2O95096 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.75□□□□□ -1.97
NKX2-2O95096 CTHRC1P1-201ENST00000605383 469 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 RNU6-85P-201ENST00000605989 107 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-2O95096 FAM157A-202ENST00000615155 405 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
NKX2-2O95096 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-2O95096 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-2O95096 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-2O95096 RNU6-858P-201ENST00000362436 107 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 Y_RNA.373-201ENST00000365600 103 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.74□□□□□ -1.97
NKX2-2O95096 AC009161.1-201ENST00000417306 376 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 AL117339.3-201ENST00000418733 162 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-2O95096 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-2O95096 RPL31P58-201ENST00000469001 379 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 RPL7P43-201ENST00000478876 753 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 RPS29P2-201ENST00000479278 136 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 TRBVA-201ENST00000498804 316 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 SLC25A15P5-201ENST00000508033 253 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.74□□□□□ -1.97
NKX2-2O95096 RNU6-1314P-201ENST00000517139 104 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 PSMA3P-201ENST00000555485 635 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 OR1M4P-201ENST00000589199 287 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 RBM11P1-201ENST00000604951 799 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 AL357078.3-201ENST00000607528 618 ntBASIC2.74□□□□□ -1.97
NKX2-2O95096 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms