Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ADI1P3-201ENST00000549509 470 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1BO75841 AC026464.5-201ENST00000562497 722 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AL354943.1-201ENST00000572103 781 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1BO75841 MIR548AC-201ENST00000585049 88 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 BNIP3P33-201ENST00000598912 569 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AL670379.2-201ENST00000604983 252 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AL670379.4-201ENST00000605279 254 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC012409.4-201ENST00000612923 249 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 U6.42-201ENST00000618440 107 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1BO75841 AC007671.2-201ENST00000637344 619 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UPK1BO75841 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1BO75841 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1BO75841 MTND5P10-201ENST00000603719 1809 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1BO75841 SNORA80A-201ENST00000363922 136 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 RNU6-384P-201ENST00000364900 104 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 RNU6-487P-201ENST00000365430 104 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 MIR597-201ENST00000384968 97 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 RNU11-3P-201ENST00000391111 133 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 MTCO3P5-201ENST00000433620 714 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC119618.1-201ENST00000434191 222 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK1BO75841 AL109933.2-201ENST00000452651 260 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC068587.2-201ENST00000478386 781 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
UPK1BO75841 RNA5SP356-201ENST00000515972 94 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK1BO75841 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK1BO75841 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK1BO75841 TMF1P1-201ENST00000576058 373 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC078795.2-201ENST00000602835 1252 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AL138889.2-201ENST00000603883 242 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK1BO75841 TUSC7.1-201ENST00000610969 165 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AL132822.1-201ENST00000617063 513 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC006386.2-201ENST00000624491 75 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 AC012005.1-201ENST00000624575 75 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 OR4G3P-201ENST00000633500 913 ntBASIC1.48□□□□□ -2.17
UPK1BO75841 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1BO75841 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1BO75841 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UPK1BO75841 snoU2_19.1-201ENST00000362361 80 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RNU6-1210P-201ENST00000363775 107 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 Y_RNA.333-201ENST00000365274 102 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 SNORD115.1-201ENST00000391109 76 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AC068050.1-201ENST00000394891 380 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RPS3AP36-201ENST00000398190 775 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RNU2-2P-201ENST00000410396 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1BO75841 RPL23AP39-201ENST00000415533 405 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AC074117.2-201ENST00000417130 397 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1BO75841 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK1BO75841 AL365184.2-201ENST00000431139 435 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1BO75841 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK1BO75841 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1BO75841 NDUFB1P2-201ENST00000449477 176 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AC108938.1-201ENST00000451204 136 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AL353752.1-201ENST00000454946 260 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RNA5SP57-201ENST00000459463 123 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RPL30P12-201ENST00000474666 353 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 ANXA2P1-201ENST00000505539 926 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RBBP4P6-201ENST00000508098 202 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 BNIP3P6-201ENST00000549284 499 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1BO75841 MIR5697-201ENST00000578045 78 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1BO75841 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1BO75841 BNIP3P25-201ENST00000596023 559 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AC012065.4-201ENST00000602445 679 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 AL033523.1-201ENST00000605153 153 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.15-201ENST00000611544 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.16-201ENST00000613119 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.12-201ENST00000613778 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.20-201ENST00000613956 192 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.9-201ENST00000615427 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.11-201ENST00000616345 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.2-201ENST00000616535 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.3-201ENST00000617785 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.19-201ENST00000618602 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 RNU2-1-201ENST00000618664 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.6-201ENST00000619225 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 U2.5-201ENST00000619465 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1BO75841 U2.10-201ENST00000620268 191 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 MIR6873-201ENST00000622788 63 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 HAUS6P2-201ENST00000433254 2404 ntBASIC1.47□□□□□ -2.17
UPK1BO75841 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UPK1BO75841 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
UPK1BO75841 SNORD56.1-201ENST00000362913 68 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 RNU6-501P-201ENST00000364072 100 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 RNU6-611P-201ENST00000384276 104 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 SNORA24.1-201ENST00000384401 135 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 RNU2-23P-201ENST00000410545 195 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms