Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC084824.5-201ENST00000612009 413 ntBASIC1.36□□□□□ -2.19
SCN2BO60939 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
SCN2BO60939 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.36□□□□□ -2.19
SCN2BO60939 MIR7843-201ENST00000622274 79 ntBASIC1.36□□□□□ -2.19
SCN2BO60939 FRG1KP-201ENST00000623592 341 ntBASIC1.36□□□□□ -2.19
SCN2BO60939 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN2BO60939 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SCN2BO60939 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SCN2BO60939 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SCN2BO60939 RNU6-166P-201ENST00000384371 107 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 MIR29B2-201ENST00000385055 81 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SCN2BO60939 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2BO60939 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2BO60939 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 VN1R108P-201ENST00000431580 830 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 snoU13.9-201ENST00000458927 103 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 AC132942.1-201ENST00000486753 483 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
SCN2BO60939 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN2BO60939 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.35□□□□□ -2.19
SCN2BO60939 AC009712.1-201ENST00000564938 316 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.35□□□□□ -2.19
SCN2BO60939 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 AC007363.1-201ENST00000604736 620 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 RNU6-1192P-201ENST00000612197 107 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 RNU6-489P-201ENST00000618289 107 ntBASIC1.35□□□□□ -2.19
SCN2BO60939 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SCN2BO60939 RNU6-462P-201ENST00000362659 105 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 Y_RNA.99-201ENST00000363138 105 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SCN2BO60939 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.34□□□□□ -2.19
SCN2BO60939 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.34□□□□□ -2.19
SCN2BO60939 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN2BO60939 TOMM20P4-201ENST00000427861 435 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 PTENP1-201ENST00000447117 1215 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN2BO60939 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.34□□□□□ -2.19
SCN2BO60939 MTCYBP35-201ENST00000503630 1137 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.34□□□□□ -2.19
SCN2BO60939 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.34□□□□□ -2.19
SCN2BO60939 AC097468.3-201ENST00000607956 456 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 AC012360.2-201ENST00000609349 391 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 Z82243.1-201ENST00000609432 473 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 AC091304.6-201ENST00000619761 202 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 AC123767.1-202ENST00000620407 817 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 AC009269.6-201ENST00000621778 588 ntBASIC1.34□□□□□ -2.19
SCN2BO60939 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SCN2BO60939 Y_RNA.33-201ENST00000362591 102 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 RNU6-1210P-201ENST00000363775 107 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SCN2BO60939 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.33□□□□□ -2.2
SCN2BO60939 Y_RNA.534-201ENST00000384599 112 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 MIR764-201ENST00000390811 85 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC119751.3-201ENST00000399720 670 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.33□□□□□ -2.2
SCN2BO60939 CBX3P9-201ENST00000402326 552 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 RNA5SP100-201ENST00000410903 110 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 RNA5SP59-201ENST00000410922 110 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.33□□□□□ -2.2
SCN2BO60939 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2BO60939 MTCO3P5-201ENST00000433620 714 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AL591212.2-201ENST00000433923 257 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AL590365.1-201ENST00000450788 243 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2BO60939 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.33□□□□□ -2.2
SCN2BO60939 AL121594.1-201ENST00000475906 575 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN2BO60939 MTND1P3-201ENST00000484956 952 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 HMGB1P30-201ENST00000492455 606 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC108210.2-201ENST00000503681 201 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 SUMO2P5-201ENST00000506790 245 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN2BO60939 AC025465.3-201ENST00000510570 311 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 RNU6-677P-201ENST00000516914 101 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.33□□□□□ -2.2
SCN2BO60939 CR383656.8-201ENST00000549046 145 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN2BO60939 TRAV32-201ENST00000553993 340 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.33□□□□□ -2.2
SCN2BO60939 MIR1273C-201ENST00000578669 77 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 AL365204.3-201ENST00000612448 685 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.33□□□□□ -2.2
SCN2BO60939 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SCN2BO60939 RNU6-743P-201ENST00000364151 106 ntBASIC1.32□□□□□ -2.2
SCN2BO60939 RNU6-395P-201ENST00000365662 106 ntBASIC1.32□□□□□ -2.2
SCN2BO60939 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SCN2BO60939 AL035666.1-201ENST00000446195 348 ntBASIC1.32□□□□□ -2.2
SCN2BO60939 AC007327.1-201ENST00000447461 264 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms