Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZIC3O60481 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
ZIC3O60481 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ZIC3O60481 RNU6-562P-201ENST00000362731 107 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 Y_RNA.61-201ENST00000362835 102 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 RNU4-73P-201ENST00000363164 141 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 RNU6-898P-201ENST00000365627 104 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AL360182.1-201ENST00000397433 468 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 RN7SKP220-201ENST00000410611 288 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.81□□□□□ -1.96
ZIC3O60481 SNORD56-201ENST00000413522 71 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.81□□□□□ -1.96
ZIC3O60481 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.81□□□□□ -1.96
ZIC3O60481 MTND3P23-201ENST00000431980 347 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.81□□□□□ -1.96
ZIC3O60481 HMGN2P10-201ENST00000448085 265 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 snoU109.2-201ENST00000459316 135 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 RNU7-23P-201ENST00000459465 62 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 MTND5P5-201ENST00000503764 376 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 AC092436.3-201ENST00000511788 257 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.81□□□□□ -1.96
ZIC3O60481 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 SNORA74D-201ENST00000516404 141 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 Y_RNA.687-201ENST00000516558 91 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.81□□□□□ -1.96
ZIC3O60481 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.81□□□□□ -1.96
ZIC3O60481 AP005639.2-201ENST00000527592 928 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.81□□□□□ -1.96
ZIC3O60481 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.81□□□□□ -1.96
ZIC3O60481 OR1M4P-201ENST00000589199 287 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AL451007.1-201ENST00000595491 289 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AL591516.1-201ENST00000611326 274 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 ATP5A1P2-202ENST00000616464 443 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ZIC3O60481 AC110491.1-201ENST00000562191 2010 ntBASIC2.81□□□□□ -1.96
ZIC3O60481 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ZIC3O60481 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZIC3O60481 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
ZIC3O60481 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC110774.1-201ENST00000623567 2018 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
ZIC3O60481 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.8□□□□□ -1.96
ZIC3O60481 RNU6-1329P-201ENST00000365664 107 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 RNU6-214P-201ENST00000384130 107 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 SNORD73A-201ENST00000386062 65 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 SNORA48.2-201ENST00000390926 124 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 MIR548F5-201ENST00000408421 86 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 U3.37-201ENST00000408528 213 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC023141.4-201ENST00000412031 328 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.8□□□□□ -1.96
ZIC3O60481 RPS12P18-201ENST00000442381 270 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC092001.1-201ENST00000453012 261 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 RPL23AP45-201ENST00000476406 468 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 HMGN2P13-201ENST00000476476 274 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC010265.1-201ENST00000513509 211 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 SNORA64.4-201ENST00000516632 81 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC026371.1-201ENST00000551867 419 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC021739.1-201ENST00000559631 174 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC138761.3-201ENST00000579993 334 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.8□□□□□ -1.96
ZIC3O60481 POLR3GP2-201ENST00000588366 668 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 ELOCP5-201ENST00000604924 333 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.8□□□□□ -1.96
ZIC3O60481 AC091953.5-201ENST00000622919 233 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 AC138627.2-201ENST00000624202 601 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ZIC3O60481 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ZIC3O60481 AC233263.6-201ENST00000631132 1963 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 CDC27P3-201ENST00000635418 1910 ntBASIC2.8□□□□□ -1.96
ZIC3O60481 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZIC3O60481 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZIC3O60481 MIR422A-201ENST00000362286 90 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SNORD56.3-201ENST00000363507 71 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SNORA54-201ENST00000384281 123 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 Y_RNA.509-201ENST00000384506 99 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SNORD67-201ENST00000390833 111 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SNORA48.8-201ENST00000391324 134 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.79□□□□□ -1.96
ZIC3O60481 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.79□□□□□ -1.96
ZIC3O60481 AL590632.1-201ENST00000424289 371 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 TOMM20P4-201ENST00000427861 435 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms