Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA2O43364 MFSD8-242ENST00000641690 4199 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
HOXA2O43364 AC022336.2-201ENST00000568966 2538 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXA2O43364 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA2O43364 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HOXA2O43364 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA2O43364 Y_RNA.329-201ENST00000365209 107 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 RNU6-763P-201ENST00000390865 106 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 RNU6-578P-201ENST00000390980 103 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA2O43364 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA2O43364 HMGB3P8-201ENST00000449709 577 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA2O43364 DEFB131C-201ENST00000528817 165 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 AC233702.9-201ENST00000581528 203 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 AL078604.3-201ENST00000615580 211 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 AP005019.3-201ENST00000620418 560 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.11□□□□□ -1.59
HOXA2O43364 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HOXA2O43364 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA2O43364 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA2O43364 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA2O43364 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 RNU6-199P-201ENST00000362954 107 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RNA5SP167-201ENST00000365461 116 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RNU6-80P-201ENST00000384195 107 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 MIR708-201ENST00000390708 88 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AC007738.1-201ENST00000413892 348 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXA2O43364 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA2O43364 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXA2O43364 AC079168.2-201ENST00000453977 416 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RNU6-1211P-201ENST00000459179 105 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AP000873.1-201ENST00000463987 400 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AC007215.1-201ENST00000464893 276 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 UQCRHP4-201ENST00000471686 272 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AC078817.1-201ENST00000492623 435 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RNA5SP497-201ENST00000516081 97 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RNA5SP360-201ENST00000516555 118 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXA2O43364 AC069294.1-201ENST00000608397 350 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXA2O43364 MIR3529-201ENST00000637713 78 ntBASIC5.1□□□□□ -1.59
HOXA2O43364 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA2O43364 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA2O43364 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA2O43364 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA2O43364 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXA2O43364 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXA2O43364 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXA2O43364 AC104623.2-202ENST00000623477 4002 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 RNU6-324P-201ENST00000363957 106 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 RNU6-1280P-201ENST00000365211 107 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 U3.22-201ENST00000391120 215 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 PPIAP31-201ENST00000405422 495 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 HMGB1P37-201ENST00000439613 609 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 RPL26P9-201ENST00000457466 433 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXA2O43364 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXA2O43364 RNU6-1073P-201ENST00000517182 106 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 RPL23AP53-201ENST00000521854 457 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 AC022616.8-201ENST00000533569 253 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 AP002001.1-203ENST00000534002 267 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXA2O43364 AC012468.1-201ENST00000604888 430 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 AL591034.3-201ENST00000605511 685 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 U3.53-201ENST00000628922 216 ntBASIC5.09□□□□□ -1.59
HOXA2O43364 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXA2O43364 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXA2O43364 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.09□□□□□ -1.6
HOXA2O43364 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.6
HOXA2O43364 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
HOXA2O43364 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
HOXA2O43364 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
HOXA2O43364 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXA2O43364 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms