Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 AC022336.2-201ENST00000568966 2538 ntBASIC3.13□□□□□ -1.91
MSI1O43347 MIR412-201ENST00000362142 91 ntBASIC3.13□□□□□ -1.91
MSI1O43347 Y_RNA.813-201ENST00000364639 102 ntBASIC3.13□□□□□ -1.91
MSI1O43347 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.13□□□□□ -1.91
MSI1O43347 RNU6-166P-201ENST00000384371 107 ntBASIC3.13□□□□□ -1.91
MSI1O43347 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.13□□□□□ -1.91
MSI1O43347 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
MSI1O43347 RPL7P37-201ENST00000425095 738 ntBASIC3.13□□□□□ -1.91
MSI1O43347 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
MSI1O43347 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.13□□□□□ -1.91
MSI1O43347 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
MSI1O43347 RPL32P28-201ENST00000443577 397 ntBASIC3.13□□□□□ -1.91
MSI1O43347 UBE2V1P7-201ENST00000446395 340 ntBASIC3.13□□□□□ -1.91
MSI1O43347 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.13□□□□□ -1.91
MSI1O43347 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.13□□□□□ -1.91
MSI1O43347 AC104472.2-201ENST00000469035 601 ntBASIC3.13□□□□□ -1.91
MSI1O43347 HMGB1P30-201ENST00000492455 606 ntBASIC3.13□□□□□ -1.91
MSI1O43347 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.13□□□□□ -1.91
MSI1O43347 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
MSI1O43347 Y_RNA.675-201ENST00000516389 149 ntBASIC3.13□□□□□ -1.91
MSI1O43347 MIR892C-201ENST00000516410 77 ntBASIC3.13□□□□□ -1.91
MSI1O43347 RNU6-566P-201ENST00000516790 107 ntBASIC3.13□□□□□ -1.91
MSI1O43347 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.13□□□□□ -1.91
MSI1O43347 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.13□□□□□ -1.91
MSI1O43347 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.13□□□□□ -1.91
MSI1O43347 HPRT1P3-201ENST00000539521 576 ntBASIC3.13□□□□□ -1.91
MSI1O43347 H3F3AP1-201ENST00000559984 334 ntBASIC3.13□□□□□ -1.91
MSI1O43347 POLR3GP2-201ENST00000588366 668 ntBASIC3.13□□□□□ -1.91
MSI1O43347 AL451007.1-201ENST00000595491 289 ntBASIC3.13□□□□□ -1.91
MSI1O43347 HSPE1P7-201ENST00000604681 321 ntBASIC3.13□□□□□ -1.91
MSI1O43347 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
MSI1O43347 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 CUL1P1-201ENST00000509510 2425 ntBASIC3.13□□□□□ -1.91
MSI1O43347 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.13□□□□□ -1.91
MSI1O43347 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
MSI1O43347 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSI1O43347 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
MSI1O43347 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.12□□□□□ -1.91
MSI1O43347 Y_RNA.324-201ENST00000365165 102 ntBASIC3.12□□□□□ -1.91
MSI1O43347 SNORA44-201ENST00000384584 132 ntBASIC3.12□□□□□ -1.91
MSI1O43347 RPS4XP3-201ENST00000398541 413 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AP000567.1-201ENST00000406413 156 ntBASIC3.12□□□□□ -1.91
MSI1O43347 FAT1P1-201ENST00000406588 507 ntBASIC3.12□□□□□ -1.91
MSI1O43347 MIR548K-201ENST00000408406 116 ntBASIC3.12□□□□□ -1.91
MSI1O43347 MIR548F5-201ENST00000408421 86 ntBASIC3.12□□□□□ -1.91
MSI1O43347 Y_RNA.623-201ENST00000411128 95 ntBASIC3.12□□□□□ -1.91
MSI1O43347 NCOR1P3-201ENST00000420479 303 ntBASIC3.12□□□□□ -1.91
MSI1O43347 SKA2P1-201ENST00000425592 390 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC098614.2-201ENST00000426040 255 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
MSI1O43347 HMGB1P9-201ENST00000429856 646 ntBASIC3.12□□□□□ -1.91
MSI1O43347 BRK1P2-201ENST00000442875 223 ntBASIC3.12□□□□□ -1.91
MSI1O43347 NDUFB1P2-201ENST00000449477 176 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC233279.1-201ENST00000455300 423 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
MSI1O43347 RPS29P26-201ENST00000477483 171 ntBASIC3.12□□□□□ -1.91
MSI1O43347 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.12□□□□□ -1.91
MSI1O43347 AC008526.1-201ENST00000509149 338 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC006445.2-201ENST00000510061 472 ntBASIC3.12□□□□□ -1.91
MSI1O43347 RNU6-1332P-201ENST00000516666 104 ntBASIC3.12□□□□□ -1.91
MSI1O43347 RNU6-572P-201ENST00000516724 80 ntBASIC3.12□□□□□ -1.91
MSI1O43347 RNA5SP454-201ENST00000517231 127 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.12□□□□□ -1.91
MSI1O43347 AP005639.2-201ENST00000527592 928 ntBASIC3.12□□□□□ -1.91
MSI1O43347 HMGB1P14-201ENST00000557424 591 ntBASIC3.12□□□□□ -1.91
MSI1O43347 APOOP1-201ENST00000604695 592 ntBASIC3.12□□□□□ -1.91
MSI1O43347 AC123912.5-201ENST00000605470 343 ntBASIC3.12□□□□□ -1.91
MSI1O43347 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MSI1O43347 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MSI1O43347 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
MSI1O43347 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MSI1O43347 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNU4-79P-201ENST00000362764 141 ntBASIC3.11□□□□□ -1.91
MSI1O43347 Y_RNA.58-201ENST00000362807 102 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNU6-778P-201ENST00000363269 103 ntBASIC3.11□□□□□ -1.91
MSI1O43347 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
MSI1O43347 Y_RNA.154-201ENST00000363624 102 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNY3P1-201ENST00000365085 102 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNY3-201ENST00000365484 102 ntBASIC3.11□□□□□ -1.91
MSI1O43347 SNORD116-11-201ENST00000383882 92 ntBASIC3.11□□□□□ -1.91
MSI1O43347 Y_RNA.490-201ENST00000384413 102 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNU6-1035P-201ENST00000384477 107 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RNU4-14P-201ENST00000410858 122 ntBASIC3.11□□□□□ -1.91
MSI1O43347 AC007560.1-201ENST00000426912 237 ntBASIC3.11□□□□□ -1.91
MSI1O43347 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MSI1O43347 RPS3AP52-201ENST00000435639 297 ntBASIC3.11□□□□□ -1.91
MSI1O43347 SETP5-201ENST00000437270 562 ntBASIC3.11□□□□□ -1.91
MSI1O43347 MTND1P17-201ENST00000448961 204 ntBASIC3.11□□□□□ -1.91
MSI1O43347 AC092798.1-201ENST00000458542 409 ntBASIC3.11□□□□□ -1.91
MSI1O43347 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
MSI1O43347 MTCO1P29-201ENST00000496868 288 ntBASIC3.11□□□□□ -1.91
MSI1O43347 MTND5P5-201ENST00000503764 376 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms