Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC090132.2-201ENST00000615881 347 ntBASIC3.66□□□□□ -1.82
PAX4O43316 AC118658.2-201ENST00000618697 459 ntBASIC3.66□□□□□ -1.82
PAX4O43316 U6.115-201ENST00000636045 103 ntBASIC3.66□□□□□ -1.82
PAX4O43316 AC073136.1-201ENST00000449426 2884 ntBASIC3.66□□□□□ -1.82
PAX4O43316 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.66□□□□□ -1.82
PAX4O43316 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PAX4O43316 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PAX4O43316 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PAX4O43316 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PAX4O43316 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.66□□□□□ -1.82
PAX4O43316 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PAX4O43316 AC027290.2-201ENST00000623210 18662 ntBASIC3.65□□□□□ -1.82
PAX4O43316 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PAX4O43316 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.65□□□□□ -1.82
PAX4O43316 THAP12P5-201ENST00000405864 2275 ntBASIC3.65□□□□□ -1.82
PAX4O43316 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PAX4O43316 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PAX4O43316 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.65□□□□□ -1.82
PAX4O43316 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PAX4O43316 AC063976.2-201ENST00000425667 3556 ntBASIC3.65□□□□□ -1.82
PAX4O43316 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
PAX4O43316 RNU6-1167P-201ENST00000363227 94 ntBASIC3.65□□□□□ -1.83
PAX4O43316 SNORA51.1-201ENST00000363243 140 ntBASIC3.65□□□□□ -1.83
PAX4O43316 Y_RNA.179-201ENST00000363844 90 ntBASIC3.65□□□□□ -1.83
PAX4O43316 SNORD18B-201ENST00000365659 72 ntBASIC3.65□□□□□ -1.83
PAX4O43316 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
PAX4O43316 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.65□□□□□ -1.83
PAX4O43316 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.65□□□□□ -1.83
PAX4O43316 AC126124.2-201ENST00000413542 321 ntBASIC3.65□□□□□ -1.83
PAX4O43316 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.65□□□□□ -1.83
PAX4O43316 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.65□□□□□ -1.83
PAX4O43316 RN7SL172P-201ENST00000460535 303 ntBASIC3.65□□□□□ -1.83
PAX4O43316 UQCRHP4-201ENST00000471686 272 ntBASIC3.65□□□□□ -1.83
PAX4O43316 RN7SL814P-201ENST00000487715 300 ntBASIC3.65□□□□□ -1.83
PAX4O43316 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.65□□□□□ -1.83
PAX4O43316 RNU6-267P-201ENST00000516714 103 ntBASIC3.65□□□□□ -1.83
PAX4O43316 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PAX4O43316 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.65□□□□□ -1.83
PAX4O43316 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.65□□□□□ -1.83
PAX4O43316 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.65□□□□□ -1.83
PAX4O43316 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PAX4O43316 SUMO2P15-201ENST00000604285 278 ntBASIC3.65□□□□□ -1.83
PAX4O43316 RMST_8.1-201ENST00000610287 165 ntBASIC3.65□□□□□ -1.83
PAX4O43316 AC126915.2-201ENST00000610957 190 ntBASIC3.65□□□□□ -1.83
PAX4O43316 AL355480.1-201ENST00000629041 99 ntBASIC3.65□□□□□ -1.83
PAX4O43316 BMS1P21-201ENST00000634565 365 ntBASIC3.65□□□□□ -1.83
PAX4O43316 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PAX4O43316 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PAX4O43316 A2MP1-204ENST00000566278 4130 ntBASIC3.65□□□□□ -1.83
PAX4O43316 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.65□□□□□ -1.83
PAX4O43316 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PAX4O43316 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAX4O43316 MIR367-201ENST00000362299 68 ntBASIC3.64□□□□□ -1.83
PAX4O43316 Y_RNA.52-201ENST00000362760 96 ntBASIC3.64□□□□□ -1.83
PAX4O43316 U3.3-201ENST00000362986 216 ntBASIC3.64□□□□□ -1.83
PAX4O43316 RNU6-1155P-201ENST00000363554 107 ntBASIC3.64□□□□□ -1.83
PAX4O43316 RN7SKP113-201ENST00000363891 295 ntBASIC3.64□□□□□ -1.83
PAX4O43316 Y_RNA.368-201ENST00000365547 113 ntBASIC3.64□□□□□ -1.83
PAX4O43316 SNORA36C-201ENST00000384289 132 ntBASIC3.64□□□□□ -1.83
PAX4O43316 SNORA40C-201ENST00000391285 128 ntBASIC3.64□□□□□ -1.83
PAX4O43316 RNU6-855P-201ENST00000410395 104 ntBASIC3.64□□□□□ -1.83
PAX4O43316 RPS20P14-201ENST00000412545 360 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.64□□□□□ -1.83
PAX4O43316 EIF1AXP1-201ENST00000419267 435 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AC091390.3-201ENST00000426478 338 ntBASIC3.64□□□□□ -1.83
PAX4O43316 FTH1P6-201ENST00000430768 320 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AL021397.1-201ENST00000451806 248 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.64□□□□□ -1.83
PAX4O43316 RN7SL443P-201ENST00000464331 290 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AC009127.1-201ENST00000467090 155 ntBASIC3.64□□□□□ -1.83
PAX4O43316 SNORA31.19-201ENST00000517079 126 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PAX4O43316 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.64□□□□□ -1.83
PAX4O43316 MIR5009-201ENST00000578736 100 ntBASIC3.64□□□□□ -1.83
PAX4O43316 MIR5588-201ENST00000581890 63 ntBASIC3.64□□□□□ -1.83
PAX4O43316 MIR3176-201ENST00000582210 90 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AC006380.1-201ENST00000603598 186 ntBASIC3.64□□□□□ -1.83
PAX4O43316 MIR6862-1-201ENST00000613016 70 ntBASIC3.64□□□□□ -1.83
PAX4O43316 MIR6862-2-201ENST00000614755 70 ntBASIC3.64□□□□□ -1.83
PAX4O43316 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.64□□□□□ -1.83
PAX4O43316 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PAX4O43316 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.64□□□□□ -1.83
PAX4O43316 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.64□□□□□ -1.83
PAX4O43316 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.64□□□□□ -1.83
PAX4O43316 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PAX4O43316 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PAX4O43316 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PAX4O43316 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.63□□□□□ -1.83
PAX4O43316 AC017071.1-201ENST00000564407 2204 ntBASIC3.63□□□□□ -1.83
PAX4O43316 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PAX4O43316 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PAX4O43316 AC010329.2-201ENST00000595195 2737 ntBASIC3.63□□□□□ -1.83
PAX4O43316 MIR302B-201ENST00000362188 73 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms