Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC105148.1-201ENST00000604961 409 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC121334.2-201ENST00000605387 271 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC126118.1-201ENST00000607744 628 ntBASIC1.77□□□□□ -2.13
LSM1O15116 uc_338.15-201ENST00000615470 191 ntBASIC1.77□□□□□ -2.13
LSM1O15116 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
LSM1O15116 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LSM1O15116 Y_RNA.18-201ENST00000362461 102 ntBASIC1.76□□□□□ -2.13
LSM1O15116 Y_RNA.40-201ENST00000362645 93 ntBASIC1.76□□□□□ -2.13
LSM1O15116 RNU6-660P-201ENST00000364566 109 ntBASIC1.76□□□□□ -2.13
LSM1O15116 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
LSM1O15116 RNU6-611P-201ENST00000384276 104 ntBASIC1.76□□□□□ -2.13
LSM1O15116 RNU6-1274P-201ENST00000384557 107 ntBASIC1.76□□□□□ -2.13
LSM1O15116 MIR513B-201ENST00000385136 84 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
LSM1O15116 MIR1262-201ENST00000408276 93 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC009518.2-201ENST00000418056 731 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AL354692.1-201ENST00000423044 315 ntBASIC1.76□□□□□ -2.13
LSM1O15116 HSPE1P21-201ENST00000438283 308 ntBASIC1.76□□□□□ -2.13
LSM1O15116 CR769776.1-201ENST00000441254 787 ntBASIC1.76□□□□□ -2.13
LSM1O15116 CALM1P1-201ENST00000442082 433 ntBASIC1.76□□□□□ -2.13
LSM1O15116 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.76□□□□□ -2.13
LSM1O15116 SSXP1-201ENST00000453640 473 ntBASIC1.76□□□□□ -2.13
LSM1O15116 SNORA59A-201ENST00000459326 152 ntBASIC1.76□□□□□ -2.13
LSM1O15116 RPL38P4-201ENST00000502376 214 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC096745.1-201ENST00000509945 370 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM1O15116 AP004607.1-201ENST00000524456 203 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM1O15116 AC090888.2-201ENST00000559765 1144 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC091489.2-201ENST00000566263 604 ntBASIC1.76□□□□□ -2.13
LSM1O15116 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM1O15116 MIR4648-201ENST00000580107 72 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC005014.3-201ENST00000605985 190 ntBASIC1.76□□□□□ -2.13
LSM1O15116 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM1O15116 ZNF876P-202ENST00000398732 1485 ntBASIC1.75□□□□□ -2.13
LSM1O15116 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.75□□□□□ -2.13
LSM1O15116 RNU6-858P-201ENST00000362436 107 ntBASIC1.75□□□□□ -2.13
LSM1O15116 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM1O15116 USP9YP18-201ENST00000425912 695 ntBASIC1.75□□□□□ -2.13
LSM1O15116 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.75□□□□□ -2.13
LSM1O15116 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.75□□□□□ -2.13
LSM1O15116 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM1O15116 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
LSM1O15116 RPL21P99-201ENST00000480369 423 ntBASIC1.75□□□□□ -2.13
LSM1O15116 MTND3P3-201ENST00000505004 126 ntBASIC1.75□□□□□ -2.13
LSM1O15116 AC107393.1-201ENST00000512403 346 ntBASIC1.75□□□□□ -2.13
LSM1O15116 AC116347.2-201ENST00000514912 523 ntBASIC1.75□□□□□ -2.13
LSM1O15116 RNA5SP337-201ENST00000517007 109 ntBASIC1.75□□□□□ -2.13
LSM1O15116 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.75□□□□□ -2.13
LSM1O15116 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 AP000763.2-201ENST00000540641 163 ntBASIC1.75□□□□□ -2.13
LSM1O15116 AC018630.3-201ENST00000542637 96 ntBASIC1.75□□□□□ -2.13
LSM1O15116 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM1O15116 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
LSM1O15116 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 AL031281.1-201ENST00000604049 488 ntBASIC1.75□□□□□ -2.13
LSM1O15116 AC012360.2-201ENST00000609349 391 ntBASIC1.75□□□□□ -2.13
LSM1O15116 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.75□□□□□ -2.13
LSM1O15116 AC092140.2-201ENST00000618027 521 ntBASIC1.75□□□□□ -2.13
LSM1O15116 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 AP002782.1-201ENST00000623107 614 ntBASIC1.75□□□□□ -2.13
LSM1O15116 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.75□□□□□ -2.13
LSM1O15116 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
LSM1O15116 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LSM1O15116 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
LSM1O15116 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LSM1O15116 U8.2-201ENST00000363156 134 ntBASIC1.74□□□□□ -2.13
LSM1O15116 RNU6-384P-201ENST00000364900 104 ntBASIC1.74□□□□□ -2.13
LSM1O15116 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
LSM1O15116 RNU6-809P-201ENST00000384461 107 ntBASIC1.74□□□□□ -2.13
LSM1O15116 RNU6-253P-201ENST00000384730 105 ntBASIC1.74□□□□□ -2.13
LSM1O15116 MIR29C-201ENST00000385231 88 ntBASIC1.74□□□□□ -2.13
LSM1O15116 RNU2-23P-201ENST00000410545 195 ntBASIC1.74□□□□□ -2.13
LSM1O15116 UBE2V1P10-201ENST00000414685 269 ntBASIC1.74□□□□□ -2.13
LSM1O15116 SSR1P2-201ENST00000415208 787 ntBASIC1.74□□□□□ -2.13
LSM1O15116 AL008987.1-201ENST00000415528 237 ntBASIC1.74□□□□□ -2.13
LSM1O15116 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.74□□□□□ -2.13
LSM1O15116 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.74□□□□□ -2.13
LSM1O15116 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
LSM1O15116 RNU7-51P-201ENST00000516560 62 ntBASIC1.74□□□□□ -2.13
LSM1O15116 RN7SKP256-201ENST00000517201 314 ntBASIC1.74□□□□□ -2.13
LSM1O15116 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.74□□□□□ -2.13
LSM1O15116 DUXAP5-201ENST00000529668 529 ntBASIC1.74□□□□□ -2.13
LSM1O15116 AC091544.4-201ENST00000555268 342 ntBASIC1.74□□□□□ -2.13
LSM1O15116 MTCO2P2-201ENST00000591258 225 ntBASIC1.74□□□□□ -2.13
LSM1O15116 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
LSM1O15116 AP000811.1-201ENST00000603803 651 ntBASIC1.74□□□□□ -2.13
LSM1O15116 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.74□□□□□ -2.13
LSM1O15116 AL359547.2-201ENST00000615810 418 ntBASIC1.74□□□□□ -2.13
LSM1O15116 AC108479.2-201ENST00000617314 601 ntBASIC1.74□□□□□ -2.13
LSM1O15116 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.74□□□□□ -2.13
LSM1O15116 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
LSM1O15116 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LSM1O15116 RNU5E-1-201ENST00000362477 120 ntBASIC1.73□□□□□ -2.13
LSM1O15116 U8.3-201ENST00000363321 132 ntBASIC1.73□□□□□ -2.13
LSM1O15116 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms