Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RPL21P28-201ENST00000401418 483 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AL592114.1-201ENST00000403842 483 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AL590004.2-201ENST00000404787 371 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RPS4XP7-201ENST00000406274 780 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RNU6-193P-201ENST00000410977 107 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 USP9YP20-201ENST00000419224 558 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.93□□□□□ -1.94
ATP2A1O14983 AC000111.3-201ENST00000433478 193 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AL360271.2-201ENST00000447710 161 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RPL21P39-201ENST00000463605 483 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.93□□□□□ -1.94
ATP2A1O14983 AL121769.1-201ENST00000469473 401 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RPL21P93-201ENST00000480465 489 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RN7SL499P-201ENST00000481141 276 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC087190.1-201ENST00000484462 480 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 MTAPP1-201ENST00000489154 819 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC093591.1-201ENST00000491435 481 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RPL21P16-201ENST00000495531 483 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 MTCO3P9-201ENST00000506989 781 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.93□□□□□ -1.94
ATP2A1O14983 AC008716.1-201ENST00000511084 513 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RNA5SP76-201ENST00000516277 87 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 RNU6-572P-201ENST00000516724 80 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 MTND4LP26-201ENST00000518144 282 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.93□□□□□ -1.94
ATP2A1O14983 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.93□□□□□ -1.94
ATP2A1O14983 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.93□□□□□ -1.94
ATP2A1O14983 NACAP3-201ENST00000552100 481 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 SNORD53-201ENST00000579969 78 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 HMGN2P15-201ENST00000585707 270 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.93□□□□□ -1.94
ATP2A1O14983 RPL23AP78-201ENST00000599928 470 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC026585.1-201ENST00000619582 524 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 AC002064.3-201ENST00000623448 346 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ATP2A1O14983 MIR3688-2-201ENST00000636963 87 ntBASIC2.93□□□□□ -1.94
ATP2A1O14983 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ATP2A1O14983 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ATP2A1O14983 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
ATP2A1O14983 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.92□□□□□ -1.94
ATP2A1O14983 AC110491.1-201ENST00000562191 2010 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ATP2A1O14983 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATP2A1O14983 MIR412-201ENST00000362142 91 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RNU6-1127P-201ENST00000384580 107 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 SNORD37.1-201ENST00000390968 65 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 SNORD115-47-201ENST00000391226 86 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 AL606923.1-201ENST00000406616 190 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RPL7P10-201ENST00000417407 739 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 BPY2DP-201ENST00000422208 265 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.92□□□□□ -1.94
ATP2A1O14983 AL669831.1-202ENST00000428504 417 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 GTF2IP20-201ENST00000431663 360 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 GTF2IP13-201ENST00000438487 386 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 AL078601.1-201ENST00000444542 271 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RPS29P20-201ENST00000489592 171 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ATP2A1O14983 AC008549.1-201ENST00000512900 643 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RNA5SP401-201ENST00000515920 127 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RNU6-718P-201ENST00000516166 105 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RNA5SP24-201ENST00000516478 95 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RNU6-1178P-201ENST00000516674 107 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 SNORD60.2-201ENST00000516883 86 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 HSPE1P20-201ENST00000538133 289 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.92□□□□□ -1.94
ATP2A1O14983 MIR4424-201ENST00000585257 86 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 AC078899.3-201ENST00000599065 212 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 AC107304.1-201ENST00000604229 296 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 AC019159.1-201ENST00000605094 187 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 U6.42-201ENST00000618440 107 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 AC064859.1-201ENST00000624741 174 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 U6.99-201ENST00000637524 83 ntBASIC2.92□□□□□ -1.94
ATP2A1O14983 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ATP2A1O14983 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATP2A1O14983 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.91□□□□□ -1.94
ATP2A1O14983 RNY3P3-201ENST00000363816 102 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 RNU6-45P-201ENST00000384471 107 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 Y_RNA.573-201ENST00000384763 105 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATP2A1O14983 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 RPL21P90-201ENST00000415692 466 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC007560.1-201ENST00000426912 237 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 MTATP6P13-201ENST00000438531 667 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC098831.1-201ENST00000440661 216 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 NDUFB1P2-201ENST00000449477 176 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.91□□□□□ -1.94
ATP2A1O14983 SCARNA18-201ENST00000459004 134 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC103975.1-201ENST00000482506 483 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 RNU6-1183P-201ENST00000517054 60 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.91□□□□□ -1.94
ATP2A1O14983 ELOCP31-201ENST00000540463 467 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.91□□□□□ -1.94
ATP2A1O14983 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.91□□□□□ -1.94
ATP2A1O14983 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.91□□□□□ -1.94
ATP2A1O14983 MIR4782-201ENST00000577987 79 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.91□□□□□ -1.94
ATP2A1O14983 AC008739.2-201ENST00000597006 317 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC010620.2-201ENST00000600135 313 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms