Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RN7SKP272-201ENST00000516988 232 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AP005597.4-201ENST00000526762 229 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC025423.5-201ENST00000550230 219 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 EIF4BP1-201ENST00000554881 351 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-6P-201ENST00000606623 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AL022345.1-201ENST00000607292 135 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 MIR6134-201ENST00000617606 109 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.263-201ENST00000364659 114 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 RNU2-41P-201ENST00000410991 178 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL096701.2-201ENST00000416920 238 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL365400.1-201ENST00000431854 640 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 MTND4LP16-201ENST00000440828 295 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL359672.1-201ENST00000442302 409 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 BTF3P15-201ENST00000455606 336 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AMD1P1-201ENST00000457220 922 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 SNORA59A-201ENST00000459326 152 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC104472.2-201ENST00000469035 601 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC021739.1-201ENST00000559631 174 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 OR1M4P-201ENST00000589199 287 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC023043.2-201ENST00000589678 1026 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 uc_338.5-201ENST00000611839 155 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL161629.2-201ENST00000615347 275 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC010378.1-201ENST00000619270 362 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 AL137790.1-201ENST00000634283 177 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TBC1D3FA6NER0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.212-201ENST00000364177 102 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 SNORD116-11-201ENST00000383882 92 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 SNORD73A-201ENST00000386062 65 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 RAP1BP3-201ENST00000407180 549 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 U3.37-201ENST00000408528 213 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 SNORD56-201ENST00000413522 71 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 RPL7P37-201ENST00000425095 738 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AL365496.1-201ENST00000426885 215 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 HMGB1P18-201ENST00000438801 619 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 MTND1P11-201ENST00000456661 876 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 RAB11AP2-201ENST00000545905 639 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AC093732.2-201ENST00000607950 274 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 uc_338.15-201ENST00000615470 191 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 RMST_7.1-201ENST00000621935 268 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AC138627.2-201ENST00000624202 601 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 TPTEP1-208ENST00000636884 213 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 CDC27P3-201ENST00000635418 1910 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
TBC1D3FA6NER0 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 SNORA48.8-201ENST00000391324 134 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 TOMM20P4-201ENST00000427861 435 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC093019.1-201ENST00000443135 252 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 RPL23AP45-201ENST00000476406 468 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms