Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.73□□□□□ -1.81
U3KQE9 U8.4-201ENST00000363626 134 ntBASIC3.73□□□□□ -1.81
U3KQE9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.73□□□□□ -1.81
U3KQE9 SNORA18.3-201ENST00000384122 132 ntBASIC3.73□□□□□ -1.81
U3KQE9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
U3KQE9 AL357515.1-201ENST00000402967 542 ntBASIC3.73□□□□□ -1.81
U3KQE9 SNORA11.3-201ENST00000408471 128 ntBASIC3.73□□□□□ -1.81
U3KQE9 MTND4LP9-201ENST00000427694 174 ntBASIC3.73□□□□□ -1.81
U3KQE9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.73□□□□□ -1.81
U3KQE9 RPL39P29-201ENST00000447779 157 ntBASIC3.73□□□□□ -1.81
U3KQE9 PPIAP20-201ENST00000449839 135 ntBASIC3.73□□□□□ -1.81
U3KQE9 AL591473.1-201ENST00000464297 313 ntBASIC3.73□□□□□ -1.81
U3KQE9 RPS26P39-201ENST00000469206 341 ntBASIC3.73□□□□□ -1.81
U3KQE9 RN7SL319P-201ENST00000480656 221 ntBASIC3.73□□□□□ -1.81
U3KQE9 YWHAEP4-201ENST00000505390 198 ntBASIC3.73□□□□□ -1.81
U3KQE9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.73□□□□□ -1.81
U3KQE9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.73□□□□□ -1.81
U3KQE9 RNA5SP392-201ENST00000516905 112 ntBASIC3.73□□□□□ -1.81
U3KQE9 RNU6-1073P-201ENST00000517182 106 ntBASIC3.73□□□□□ -1.81
U3KQE9 AC136628.3-201ENST00000521868 290 ntBASIC3.73□□□□□ -1.81
U3KQE9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.73□□□□□ -1.81
U3KQE9 MIR5688-201ENST00000580619 83 ntBASIC3.73□□□□□ -1.81
U3KQE9 SNORA74C-1-201ENST00000580726 201 ntBASIC3.73□□□□□ -1.81
U3KQE9 AC090897.2-201ENST00000581715 130 ntBASIC3.73□□□□□ -1.81
U3KQE9 SNORA11.6-201ENST00000619030 128 ntBASIC3.73□□□□□ -1.81
U3KQE9 TUG1_4.1-201ENST00000619464 181 ntBASIC3.73□□□□□ -1.81
U3KQE9 AC019206.1-201ENST00000621938 425 ntBASIC3.73□□□□□ -1.81
U3KQE9 CR381572.2-201ENST00000624852 397 ntBASIC3.73□□□□□ -1.81
U3KQE9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
U3KQE9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
U3KQE9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
U3KQE9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
U3KQE9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
U3KQE9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
U3KQE9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.73□□□□□ -1.81
U3KQE9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.72□□□□□ -1.81
U3KQE9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.72□□□□□ -1.81
U3KQE9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.72□□□□□ -1.81
U3KQE9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
U3KQE9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
U3KQE9 AC010733.2-201ENST00000589496 5702 ntBASIC3.72□□□□□ -1.81
U3KQE9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
U3KQE9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
U3KQE9 Y_RNA.71-201ENST00000362892 104 ntBASIC3.72□□□□□ -1.81
U3KQE9 Y_RNA.337-201ENST00000365312 102 ntBASIC3.72□□□□□ -1.81
U3KQE9 U3.15-201ENST00000365398 212 ntBASIC3.72□□□□□ -1.81
U3KQE9 RNU1-106P-201ENST00000384382 164 ntBASIC3.72□□□□□ -1.81
U3KQE9 RNU6-763P-201ENST00000390865 106 ntBASIC3.72□□□□□ -1.81
U3KQE9 RNU6-710P-201ENST00000410424 105 ntBASIC3.72□□□□□ -1.81
U3KQE9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.72□□□□□ -1.81
U3KQE9 CYCSP48-201ENST00000417124 323 ntBASIC3.72□□□□□ -1.81
U3KQE9 RPL36AP10-201ENST00000421785 322 ntBASIC3.72□□□□□ -1.81
U3KQE9 RPS27P18-201ENST00000431701 247 ntBASIC3.72□□□□□ -1.81
U3KQE9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.72□□□□□ -1.81
U3KQE9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.72□□□□□ -1.81
U3KQE9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.72□□□□□ -1.81
U3KQE9 RPSAP50-201ENST00000481955 852 ntBASIC3.72□□□□□ -1.81
U3KQE9 NIP7P2-201ENST00000485801 544 ntBASIC3.72□□□□□ -1.81
U3KQE9 RN7SL558P-201ENST00000497468 299 ntBASIC3.72□□□□□ -1.81
U3KQE9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.72□□□□□ -1.81
U3KQE9 RNU6-709P-201ENST00000517257 104 ntBASIC3.72□□□□□ -1.81
U3KQE9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.72□□□□□ -1.81
U3KQE9 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
U3KQE9 AC004825.2-201ENST00000616634 455 ntBASIC3.72□□□□□ -1.81
U3KQE9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
U3KQE9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
U3KQE9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
U3KQE9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.72□□□□□ -1.81
U3KQE9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
U3KQE9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
U3KQE9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
U3KQE9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.71□□□□□ -1.81
U3KQE9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
U3KQE9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
U3KQE9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
U3KQE9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
U3KQE9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
U3KQE9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
U3KQE9 RNU6-799P-201ENST00000363567 107 ntBASIC3.71□□□□□ -1.82
U3KQE9 Y_RNA.218-201ENST00000364218 104 ntBASIC3.71□□□□□ -1.82
U3KQE9 RNU6-153P-201ENST00000364422 104 ntBASIC3.71□□□□□ -1.82
U3KQE9 Y_RNA.261-201ENST00000364631 102 ntBASIC3.71□□□□□ -1.82
U3KQE9 Y_RNA.329-201ENST00000365209 107 ntBASIC3.71□□□□□ -1.82
U3KQE9 RNU4-11P-201ENST00000365287 132 ntBASIC3.71□□□□□ -1.82
U3KQE9 RNU6-80P-201ENST00000384195 107 ntBASIC3.71□□□□□ -1.82
U3KQE9 RNU6-622P-201ENST00000384272 103 ntBASIC3.71□□□□□ -1.82
U3KQE9 SNORA70-201ENST00000384436 135 ntBASIC3.71□□□□□ -1.82
U3KQE9 SNORA8.3-201ENST00000384679 139 ntBASIC3.71□□□□□ -1.82
U3KQE9 AL355497.1-201ENST00000406262 551 ntBASIC3.71□□□□□ -1.82
U3KQE9 SNORA11B-201ENST00000408175 129 ntBASIC3.71□□□□□ -1.82
U3KQE9 MIR1271-201ENST00000408537 86 ntBASIC3.71□□□□□ -1.82
U3KQE9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.71□□□□□ -1.82
U3KQE9 HMGN2P21-201ENST00000447764 270 ntBASIC3.71□□□□□ -1.82
U3KQE9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
U3KQE9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
U3KQE9 AC079168.2-201ENST00000453977 416 ntBASIC3.71□□□□□ -1.82
U3KQE9 RPL23AP56-201ENST00000460778 453 ntBASIC3.71□□□□□ -1.82
U3KQE9 UQCRHP4-201ENST00000471686 272 ntBASIC3.71□□□□□ -1.82
U3KQE9 RN7SKP66-201ENST00000516681 231 ntBASIC3.71□□□□□ -1.82
U3KQE9 RNA5SP34-201ENST00000516887 130 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms