Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORD114-19-201ENST00000363072 75 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-38P-201ENST00000384085 107 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR491-201ENST00000384877 84 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR514A2-201ENST00000385131 88 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR514A3-201ENST00000385132 88 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNA5SP219-201ENST00000390940 113 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNA5SP120-201ENST00000410900 112 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-373P-201ENST00000411247 98 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 POLHP1-201ENST00000411806 470 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC097463.2-201ENST00000421074 142 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 C8orf59P1-201ENST00000429930 303 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 UBE2V1P8-201ENST00000437166 265 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 HMGB1P31-201ENST00000437242 427 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-333P-201ENST00000459117 107 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC008155.2-201ENST00000464337 397 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC025518.1-201ENST00000479856 347 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RN7SL499P-201ENST00000481141 276 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 MTCYBP40-201ENST00000509390 1135 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RPS15AP11-201ENST00000594193 385 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 AL442067.2-201ENST00000614033 363 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGB3Q9Y5G1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 OR56A5-201ENST00000340110 738 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-1303P-201ENST00000364841 107 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-877P-201ENST00000383868 107 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORD116-20-201ENST00000384529 92 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 Y_RNA.554-201ENST00000384672 102 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC074117.2-201ENST00000417130 397 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AL445687.1-201ENST00000439946 251 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 MTND3P16-201ENST00000452205 344 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC110794.1-201ENST00000505816 425 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 CCDC34P1-201ENST00000507441 517 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 MTND1P35-201ENST00000526739 508 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC027176.1-201ENST00000560204 514 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR3117-201ENST00000584034 78 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 VN1R80P-201ENST00000597126 338 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC002044.1-201ENST00000606707 158 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC069294.1-201ENST00000608397 350 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AL157817.1-201ENST00000614264 790 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC024581.2-201ENST00000619986 252 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC121333.1-201ENST00000567488 2709 ntBASIC3.1□□□□□ -1.91
PCDHGB3Q9Y5G1 AC080128.1-201ENST00000474389 1917 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-78P-201ENST00000362897 107 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-1106P-201ENST00000390845 107 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-1068P-201ENST00000410958 103 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 ZNF885P-201ENST00000420174 1098 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AL591043.1-201ENST00000432461 424 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 ERLEC1P1-201ENST00000433806 578 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-1208P-201ENST00000459588 107 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL23AP70-201ENST00000483361 460 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORA14.1-201ENST00000516113 141 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AC105137.2-201ENST00000569073 466 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AC092747.3-201ENST00000603769 301 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 AL121917.1-203ENST00000605534 577 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 YPEL5P2-201ENST00000605553 359 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms