Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AP001880.2-201ENST00000538233 448 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 CYCSP40-201ENST00000575927 294 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AL021997.2-201ENST00000615674 271 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 MIR8069-1-201ENST00000616627 86 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 MIR8069-2-201ENST00000621412 86 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AC091932.3-201ENST00000624223 323 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AC112200.1-201ENST00000625015 234 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AC006971.1-201ENST00000407916 4486 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 RNA5SP191-201ENST00000362585 102 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 SNORA70.2-201ENST00000364506 135 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 AL357075.1-201ENST00000404107 726 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 Y_RNA.629-201ENST00000411368 105 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 NDUFS5P4-201ENST00000412983 318 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 RPL21P66-201ENST00000426566 466 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 SEPT7P4-201ENST00000437076 306 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 RNA5SP103-201ENST00000459503 118 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 AC020890.1-201ENST00000491837 504 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-155P-201ENST00000516347 100 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 SNORD116-25-201ENST00000516517 92 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 HSPE1P5-201ENST00000561489 272 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 AL020997.2-201ENST00000602607 184 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 MIR6758-201ENST00000620653 63 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 AP001642.1-201ENST00000624727 2117 ntBASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PCDHB11Q9Y5F2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AC099654.7-201ENST00000635788 2127 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNA5SP515-201ENST00000364570 118 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-1280P-201ENST00000365211 107 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-1310P-201ENST00000384153 107 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-793P-201ENST00000384233 104 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNA5SP332-201ENST00000391063 115 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 MIR1271-201ENST00000408537 86 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 ELOCP21-201ENST00000412558 336 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RPL7AP25-201ENST00000423357 805 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RPL18P10-201ENST00000425606 538 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AC007215.1-201ENST00000464893 276 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-426P-201ENST00000516464 97 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 RNA5SP392-201ENST00000516905 112 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AC009163.5-201ENST00000575421 637 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AL451007.1-201ENST00000595491 289 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 DEFB117-201ENST00000602356 141 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AL121932.1-201ENST00000605542 214 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 Y_RNA.778-201ENST00000620203 90 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 AC107068.1-201ENST00000563286 4218 ntBASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB11Q9Y5F2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC126755.2-208ENST00000327792 462 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC138969.1-213ENST00000331436 462 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 Y_RNA.182-201ENST00000363880 111 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 UBBP2-201ENST00000376781 231 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-245P-201ENST00000384020 107 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AL512633.1-201ENST00000399931 655 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RNU2-54P-201ENST00000410299 190 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 CKS1BP6-201ENST00000424932 240 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms