Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
SF3B6Q9Y3B4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.82□□□□□ -1.8
SF3B6Q9Y3B4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SF3B6Q9Y3B4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SF3B6Q9Y3B4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.82□□□□□ -1.8
SF3B6Q9Y3B4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL353743.1-202ENST00000431724 1695 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 ADAM3A-203ENST00000461344 2157 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MIR335-201ENST00000362173 94 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 Y_RNA.541-201ENST00000384640 113 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MIR487A-201ENST00000385009 80 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MIR548I3-201ENST00000408378 149 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MIR548I1-201ENST00000408810 149 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MTND5P15-201ENST00000434246 349 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 HMGN2P10-201ENST00000448085 265 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL139109.1-201ENST00000455491 297 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 RN7SL738P-201ENST00000470264 297 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MED28P2-201ENST00000475771 317 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-138P-201ENST00000515952 107 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 HSPE1P4-201ENST00000550617 308 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL391261.3-201ENST00000557194 520 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 RN7SL690P-201ENST00000582087 240 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AC073308.1-201ENST00000623696 305 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 AL450472.1-202ENST00000637286 180 ntBASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SF3B6Q9Y3B4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNA5SP361-201ENST00000362686 118 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 Y_RNA.54-201ENST00000362766 105 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-142P-201ENST00000384019 107 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-209P-201ENST00000384118 107 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 SNORA36A-201ENST00000384221 132 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-541P-201ENST00000384709 110 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNA5SP397-201ENST00000391323 118 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 MRPL35P1-201ENST00000404272 572 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 BPY2DP-201ENST00000422208 265 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AL590135.1-201ENST00000422215 156 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AC005300.1-201ENST00000428401 373 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 C4BPAP2-201ENST00000428434 478 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AL445305.1-201ENST00000432577 575 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RPS15AP7-201ENST00000439294 405 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RPL35AP15-201ENST00000468042 339 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RPL12P20-201ENST00000475538 479 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 VWA8P1-201ENST00000510889 176 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-1338P-201ENST00000516328 91 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 NACAP3-201ENST00000552100 481 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AC021739.1-201ENST00000559631 174 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AC009163.5-201ENST00000575421 637 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 MIR4330-201ENST00000579077 105 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AL591034.3-201ENST00000605511 685 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 CUL1P1-201ENST00000509510 2425 ntBASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B6Q9Y3B4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 SNORD81.1-201ENST00000363064 77 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 SNORD113-8-201ENST00000363497 74 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 SNORD113.2-201ENST00000364166 89 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-102P-201ENST00000384485 104 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 MIR3065-201ENST00000390137 79 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 AL603910.2-201ENST00000407268 136 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RNA5SP36-201ENST00000410197 133 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 259.4 ms