Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AL160290.3-201ENST00000604869 165 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AC006133.1-201ENST00000617106 264 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 MAPK10-286ENST00000641208 8747 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 RNU1-130P-201ENST00000363930 160 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-637P-201ENST00000384050 107 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-968P-201ENST00000384076 107 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-1226P-201ENST00000384317 107 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 RNU1-44P-201ENST00000384453 163 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AL031737.1-201ENST00000450125 223 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC012158.1-204ENST00000483430 465 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AL132838.2-201ENST00000492041 314 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 SNORA40.9-201ENST00000515895 93 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC090877.1-201ENST00000561418 344 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC022968.1-201ENST00000567372 442 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 MIR4444-1-201ENST00000581696 74 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 MIR3158-1-201ENST00000583596 81 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 MIR4444-2-201ENST00000584390 74 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC062037.1-201ENST00000605302 128 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 MIR15A-201ENST00000607334 83 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC004852.3-201ENST00000614131 326 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC112484.5-201ENST00000624189 228 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC140479.6-201ENST00000633535 357 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 U6.95-201ENST00000636931 70 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 AC068647.1-201ENST00000489539 2265 ntBASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDZRN3Q9UPQ7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 FTLP6-201ENST00000355274 422 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 RNA5SP22-201ENST00000365393 109 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-573P-201ENST00000383938 106 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 MIR3065-201ENST00000390137 79 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 Z82188.1-201ENST00000436709 154 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 SNORA31.3-201ENST00000516029 96 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-352P-201ENST00000516908 107 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 AL355816.1-201ENST00000607951 118 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 TUG1_2.1-201ENST00000614234 87 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 MIR7154-201ENST00000620673 73 ntBASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDZRN3Q9UPQ7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDZRN3Q9UPQ7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 Y_RNA.35-201ENST00000362601 101 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-626P-201ENST00000363354 107 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 SNORA25.7-201ENST00000364375 127 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-741P-201ENST00000383889 107 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 RNA5SP171-201ENST00000391071 115 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 snoU13.22-201ENST00000459428 104 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 SNORD33.1-201ENST00000516213 88 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 AC008694.2-201ENST00000517591 306 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 MIR4286-201ENST00000580651 93 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 AC024153.1-201ENST00000603103 365 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 SNX18P1Y-201ENST00000616231 511 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 AC006001.4-201ENST00000622243 395 ntBASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDZRN3Q9UPQ7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-227P-201ENST00000362865 103 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-1175P-201ENST00000365200 107 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 Y_RNA.337-201ENST00000365312 102 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 SNORD12B-201ENST00000410433 91 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 RNA5SP44-201ENST00000410446 133 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AL353621.1-201ENST00000418219 243 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AC012671.1-201ENST00000451912 203 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 HMGN1P11-201ENST00000508668 303 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 LARP7P3-201ENST00000579888 337 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms