Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-727P-201ENST00000363592 107 ntBASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 RNA5SP31-201ENST00000411144 127 ntBASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM35Q9UPQ4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM35Q9UPQ4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-508P-201ENST00000363231 103 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RNY1P10-201ENST00000363268 113 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RNU1-140P-201ENST00000365040 165 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RPL21P10-201ENST00000463521 490 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 AC007215.1-201ENST00000464893 276 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RPS23P7-201ENST00000466210 444 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 SNRPGP7-201ENST00000469016 106 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RPS29P22-201ENST00000472363 168 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RPL39P34-201ENST00000477141 156 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 SNORD115-40-201ENST00000606510 82 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-94P-201ENST00000607728 107 ntBASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM35Q9UPQ4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 RNU1-62P-201ENST00000362599 164 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 Y_RNA.466-201ENST00000384294 113 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AC008065.1-201ENST00000428525 348 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 snoU13.3-201ENST00000459441 104 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 COX6B1P2-201ENST00000489624 230 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-197P-201ENST00000516680 100 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AC021231.3-201ENST00000558497 370 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AL590808.1-201ENST00000618696 141 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AC026523.2-201ENST00000625039 7739 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AL672167.1-205ENST00000641112 3080 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AL031595.2-201ENST00000624215 19071 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 AL022311.1-201ENST00000623726 19416 ntBASIC6.13□□□□□ -1.43
TRIM35Q9UPQ4 GVINP1-202ENST00000531871 7271 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-1134P-201ENST00000365156 101 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 SNORA56-201ENST00000383966 129 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 Y_RNA.549-201ENST00000384657 102 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 RN7SKP61-201ENST00000410642 295 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 Z85995.1-201ENST00000415547 335 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 OR2AH1P-201ENST00000425717 928 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 AC009237.8-201ENST00000445492 379 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 AL359073.1-201ENST00000448036 403 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 AC021205.2-201ENST00000480069 347 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-158P-201ENST00000517104 100 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 MALAT1.1-201ENST00000618249 95 ntBASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM35Q9UPQ4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 AC021146.4-201ENST00000309229 279 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 MIR659-201ENST00000384963 97 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 AC245028.1-201ENST00000423259 256 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 REREP2Y-201ENST00000439103 200 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 H2AFZP5-201ENST00000446960 382 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 RPL35AP15-201ENST00000468042 339 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms