Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL627311.1-201ENST00000431514 115 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 MTATP6P7-201ENST00000453315 681 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AC021205.2-201ENST00000480069 347 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 Y_RNA.675-201ENST00000516389 149 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AP005597.4-201ENST00000526762 229 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AL645944.1-201ENST00000603857 493 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AL050343.2-201ENST00000607338 280 ntBASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS4AQ9UN37 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 Y_RNA.387-201ENST00000383918 102 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 RNU6-1035P-201ENST00000384477 107 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 RNU4-14P-201ENST00000410858 122 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC074085.1-201ENST00000413598 418 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AL356968.1-201ENST00000416622 474 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 TMEM167AP1-201ENST00000423409 219 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 SNAP23P1-201ENST00000433229 246 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 SNRPEP4-201ENST00000435815 279 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 FABP5P14-201ENST00000437273 393 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 HIGD1AP11-201ENST00000438361 280 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC092798.1-201ENST00000458542 409 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC026801.1-201ENST00000497178 464 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 SNORA31.19-201ENST00000517079 126 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC069113.1-201ENST00000517763 267 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 RNU6-323P-201ENST00000521915 107 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 HIGD1AP1-201ENST00000550979 275 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 IMMP1LP2-201ENST00000552954 492 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC138761.3-201ENST00000579993 334 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC006557.5-201ENST00000603126 811 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC068831.7-201ENST00000616954 363 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC098657.3-201ENST00000620434 263 ntBASIC3.25□□□□□ -1.89
VPS4AQ9UN37 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS4AQ9UN37 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 RNU6-562P-201ENST00000362731 107 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 RNU6-7-201ENST00000364784 107 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 RNU6-8-201ENST00000365467 107 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 Z98749.2-208ENST00000381646 500 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 MIR888-201ENST00000401186 77 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AL096701.2-201ENST00000416920 238 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 RPL12P25-201ENST00000455592 494 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AL583843.1-201ENST00000456070 346 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 RNA5SP310-201ENST00000459084 116 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 Y_RNA.632-201ENST00000459189 102 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 MTND4P17-201ENST00000470444 350 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 RNU6-572P-201ENST00000516724 80 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 CYCSP39-201ENST00000565821 309 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC007151.1-201ENST00000572774 483 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AL451007.1-201ENST00000595491 289 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 HSPE1P7-201ENST00000604681 321 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC016727.1-205ENST00000605437 569 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC006386.2-201ENST00000624491 75 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 AC012005.1-201ENST00000624575 75 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 Z69720.2-201ENST00000624755 279 ntBASIC3.24□□□□□ -1.89
VPS4AQ9UN37 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VPS4AQ9UN37 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 Y_RNA.58-201ENST00000362807 102 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 Y_RNA.154-201ENST00000363624 102 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 RNY3P1-201ENST00000365085 102 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 RNY3-201ENST00000365484 102 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 Y_RNA.490-201ENST00000384413 102 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 MIR548F5-201ENST00000408421 86 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
VPS4AQ9UN37 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms