Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AP003122.5-201ENST00000527668 3766 ntBASIC3.55□□□□□ -1.84
CCNL1Q9UK58 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 ZNF658B-202ENST00000615961 3375 ntBASIC3.55□□□□□ -1.84
CCNL1Q9UK58 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNL1Q9UK58 SDAD1P2-201ENST00000441308 2028 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 DEFB108F-201ENST00000344638 222 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 RNU5A-1-201ENST00000362698 116 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 SNORD113-7-201ENST00000363762 77 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 Y_RNA.387-201ENST00000383918 102 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 SNORA75B-201ENST00000384053 137 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 MIR548F5-201ENST00000408421 86 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 RPLP0P7-201ENST00000416050 667 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC009963.1-201ENST00000417265 157 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 snoU13.15-201ENST00000459407 104 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 VN1R17P-201ENST00000472048 1090 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 RN7SL633P-201ENST00000488974 297 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 MTCO1P29-201ENST00000496868 288 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 TBCAP3-201ENST00000512475 312 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 SNORA14.1-201ENST00000516113 141 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 SNORA70.16-201ENST00000516390 95 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 COPS8P3-201ENST00000526024 482 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AP005639.2-201ENST00000527592 928 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AP004242.1-201ENST00000533701 349 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 FRG2DP-202ENST00000566967 323 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC012119.1-201ENST00000603184 222 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC004825.2-201ENST00000616634 455 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC006111.3-201ENST00000622137 383 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AC022418.1-201ENST00000624118 445 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 MTND1P37-201ENST00000636562 264 ntBASIC3.54□□□□□ -1.84
CCNL1Q9UK58 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCNL1Q9UK58 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AL356057.3-201ENST00000402607 340 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 RN7SKP158-201ENST00000410453 326 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 NDUFB4P7-201ENST00000423198 363 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 SAR1AP4-201ENST00000429225 591 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 MTND1P17-201ENST00000448961 204 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 RNU6-953P-201ENST00000459154 107 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 SNORA31.8-201ENST00000516327 108 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 SCARNA15.2-201ENST00000516409 127 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 RNU6-273P-201ENST00000516937 96 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 RNA5SP454-201ENST00000517231 127 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AP003122.3-201ENST00000526316 255 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AP000763.2-201ENST00000540641 163 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AC098826.3-201ENST00000603823 466 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AL161798.1-201ENST00000604630 131 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 APOOP1-201ENST00000604695 592 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 AL627309.6-201ENST00000606857 840 ntBASIC3.53□□□□□ -1.84
CCNL1Q9UK58 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNL1Q9UK58 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.53□□□□□ -1.85
CCNL1Q9UK58 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.85
CCNL1Q9UK58 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 UBE2L2-201ENST00000254302 429 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 RNU6-434P-201ENST00000384376 107 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 RNU6-45P-201ENST00000384471 107 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 RNA5SP111-201ENST00000411386 101 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 RPL7P37-201ENST00000425095 738 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 TOMM20P4-201ENST00000427861 435 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AL592045.1-201ENST00000429867 352 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AL118496.2-201ENST00000448300 230 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 SNRPGP5-201ENST00000456003 220 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 RPL23AP31-201ENST00000456160 467 ntBASIC3.52□□□□□ -1.85
CCNL1Q9UK58 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms