Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 RNA5SP515-201ENST00000364570 118 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 RNA5SP479-201ENST00000364858 117 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 RNU6-1286P-201ENST00000383871 107 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTN3Q9P232 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 RPS29P19-201ENST00000479709 171 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 RPS4XP13-201ENST00000483219 789 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 SEPT14P8-201ENST00000508026 178 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 PPBPP1-201ENST00000510807 373 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTN3Q9P232 SNORA43.2-201ENST00000516652 128 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 AC120057.2-201ENST00000571520 271 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 AC015813.4-201ENST00000610469 179 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 RNA5SP196-201ENST00000625967 102 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTN3Q9P232 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
CNTN3Q9P232 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTN3Q9P232 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CNTN3Q9P232 AC068254.2-201ENST00000623938 3577 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 AL672296.1-201ENST00000427780 2158 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTN3Q9P232 RNU6-545P-201ENST00000362681 104 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 MIR153-2-201ENST00000385225 87 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 SNORA53-201ENST00000391141 249 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 PPIAP31-201ENST00000405422 495 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 RPL23AP48-201ENST00000406913 488 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 RNU2-20P-201ENST00000410425 191 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 RNU6-1245P-201ENST00000411130 106 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 AL356095.1-201ENST00000417217 199 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 RPL23AP46-201ENST00000438548 490 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 MTATP6P7-201ENST00000453315 681 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 RNU7-120P-201ENST00000459334 63 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 SNORA25.14-201ENST00000516481 132 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 MIR2116-201ENST00000517221 80 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 MRPS36P4-201ENST00000534436 298 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 CBX3P4-201ENST00000538909 354 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTN3Q9P232 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTN3Q9P232 AC107016.1-201ENST00000550463 337 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTN3Q9P232 AL356157.2-201ENST00000605122 111 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 MIR7151-201ENST00000617477 60 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.54□□□□□ -1.68
CNTN3Q9P232 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTN3Q9P232 AL353743.1-202ENST00000431724 1695 ntBASIC4.54□□□□□ -1.68
CNTN3Q9P232 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTN3Q9P232 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 MARK2P15-201ENST00000432204 2186 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 RNU6-843P-201ENST00000384454 104 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 RNU6-140P-201ENST00000384566 108 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 PCNPP3-201ENST00000393579 471 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 RNU2-37P-201ENST00000410695 177 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 RNU6-1212P-201ENST00000517023 104 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 CYCSP39-201ENST00000565821 309 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 MIR4643-201ENST00000577473 78 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 SNORD113-5-201ENST00000607261 78 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 AC241585.2-209ENST00000638217 143 ntBASIC4.53□□□□□ -1.68
CNTN3Q9P232 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CNTN3Q9P232 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTN3Q9P232 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CNTN3Q9P232 ZNF826P-207ENST00000622273 1910 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTN3Q9P232 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTN3Q9P232 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CNTN3Q9P232 RNU6-326P-201ENST00000365480 107 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 SNORA19-201ENST00000384737 128 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 RNU1-139P-201ENST00000391307 165 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 RNU5A-5P-201ENST00000411054 116 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.52□□□□□ -1.69
CNTN3Q9P232 EIF1P2-201ENST00000428233 350 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 RPS15AP7-201ENST00000439294 405 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 CYCSP32-201ENST00000440548 321 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 HSPE1P25-201ENST00000455484 251 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 COX6CP14-201ENST00000469580 174 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 RN7SL604P-201ENST00000492589 296 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 RNU6-1183P-201ENST00000517054 60 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 AC016256.1-201ENST00000547971 354 ntBASIC4.52□□□□□ -1.69
CNTN3Q9P232 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms