Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 AL355877.2-201ENST00000603670 358 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 IPO8P1-201ENST00000455509 3109 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG3Q9NT62 SNORA48.2-201ENST00000390926 124 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 RNA5SP120-201ENST00000410900 112 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AL030996.1-201ENST00000411430 235 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC005300.1-201ENST00000428401 373 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AL591704.1-201ENST00000432574 275 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 NEFMP1-201ENST00000443423 1006 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC010655.1-201ENST00000449336 292 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC008481.1-201ENST00000463278 396 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AP000873.1-201ENST00000463987 400 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 RN7SL601P-201ENST00000471221 293 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC069499.1-201ENST00000489433 509 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 CBX3P4-201ENST00000538909 354 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 RPS29P30-201ENST00000600975 111 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AL158827.2-201ENST00000602494 330 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC007619.2-201ENST00000605743 379 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 MIR8058-201ENST00000615737 89 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AC007998.5-201ENST00000622938 237 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 AL691447.3-201ENST00000635020 330 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 AP000560.1-201ENST00000624150 1937 ntBASIC4.75□□□□□ -1.65
ATG3Q9NT62 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG3Q9NT62 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG3Q9NT62 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG3Q9NT62 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG3Q9NT62 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 RNU6-48P-201ENST00000384161 107 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 MIR625-201ENST00000385047 85 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 RNA5SP424-201ENST00000390988 115 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG3Q9NT62 MIR1298-201ENST00000408783 112 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 RNA5SP306-201ENST00000411087 107 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 Y_RNA.793-201ENST00000411222 111 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 DBIP2-201ENST00000419076 262 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AC005326.1-201ENST00000429197 123 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG3Q9NT62 FTH1P6-201ENST00000430768 320 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG3Q9NT62 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 HMGB1P25-201ENST00000468402 607 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AC078817.1-201ENST00000492623 435 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AC074198.2-201ENST00000508153 258 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AC008011.1-201ENST00000545989 227 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 RNU6-85P-201ENST00000605989 107 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 TUG1_2.1-201ENST00000614234 87 ntBASIC4.74□□□□□ -1.65
ATG3Q9NT62 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG3Q9NT62 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG3Q9NT62 Y_RNA.16-201ENST00000362421 102 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 RNU6-371P-201ENST00000364283 108 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 SNORD51-201ENST00000384320 80 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 RNU6-378P-201ENST00000384324 107 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 RNU6-14P-201ENST00000384630 106 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 AL451074.5-201ENST00000415894 435 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG3Q9NT62 SNORA59A-201ENST00000459326 152 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 RPS29P2-201ENST00000479278 136 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 NDUFB4P9-201ENST00000511646 388 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 AP002770.2-201ENST00000543613 532 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 MIR4273-201ENST00000582824 84 ntBASIC4.73□□□□□ -1.65
ATG3Q9NT62 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG3Q9NT62 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG3Q9NT62 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG3Q9NT62 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG3Q9NT62 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG3Q9NT62 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG3Q9NT62 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG3Q9NT62 AL137003.2-201ENST00000606924 2538 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 RNU6-1266P-201ENST00000362794 105 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 RNU6-1249P-201ENST00000363237 111 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 RNU6-682P-201ENST00000363843 106 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 RNU6-790P-201ENST00000384479 105 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AL160275.3-201ENST00000423876 471 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 snoU109.4-201ENST00000458953 143 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG3Q9NT62 RPL32P34-201ENST00000486380 400 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC113155.1-201ENST00000511141 769 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC144568.1-201ENST00000520139 137 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC087441.2-201ENST00000529141 262 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms