Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 Y_RNA.111-201ENST00000363248 100 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 Y_RNA.117-201ENST00000363294 101 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-72P-201ENST00000384285 79 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 MIR708-201ENST00000390708 88 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 Z92545.1-201ENST00000411782 234 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 SDAD1P3-201ENST00000427380 333 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AL591043.1-201ENST00000432461 424 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 MTND5P15-201ENST00000434246 349 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 RPL23AP22-201ENST00000437556 453 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 Z82210.1-201ENST00000440037 231 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 HMGN2P21-201ENST00000447764 270 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 SNORA59A-201ENST00000459326 152 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 PPIAP15-201ENST00000479662 484 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC010469.2-201ENST00000496412 480 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 SNORA31.18-201ENST00000517043 134 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC091167.4-201ENST00000605079 184 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 AC098479.1-201ENST00000609225 154 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AL391987.6-201ENST00000305671 199 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 MIR335-201ENST00000362173 94 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 SNORD27-201ENST00000363981 72 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AP000907.1-201ENST00000428428 510 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 RN7SL293P-201ENST00000481765 281 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AC010265.1-201ENST00000513509 211 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 SNORA31.6-201ENST00000516241 130 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 CASP1P1-201ENST00000526345 212 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AC011471.1-201ENST00000585766 187 ntBASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZFYVE28Q9HCC9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 SNORD35B-201ENST00000363660 87 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 SNORA7.2-201ENST00000364446 145 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RNY3P4-201ENST00000384428 101 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RNA5SP146-201ENST00000410743 123 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 AL035423.1-201ENST00000420331 213 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P66-201ENST00000426566 466 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P40-201ENST00000428586 483 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RPS6P12-201ENST00000432491 726 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 MTND2P29-201ENST00000438595 412 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 AC006026.2-201ENST00000457376 180 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RPL23AP65-201ENST00000475608 468 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 UBE2CP3-201ENST00000502715 450 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-138P-201ENST00000515952 107 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-182P-201ENST00000516970 105 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 RN7SKP40-201ENST00000517211 242 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 AP002770.2-201ENST00000543613 532 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 SYF2P1-201ENST00000550658 413 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 Y_RNA.772-201ENST00000606692 102 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 AP001282.2-201ENST00000616149 309 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 MIR376A1-201ENST00000616574 68 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 MIR7975-201ENST00000619350 68 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 U6.92-201ENST00000636464 89 ntBASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZFYVE28Q9HCC9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 NOL8P1-201ENST00000508336 3529 ntBASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-527P-201ENST00000363425 104 ntBASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 Y_RNA.237-201ENST00000364439 102 ntBASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-1062P-201ENST00000383908 107 ntBASIC4.6□□□□□ -1.67
ZFYVE28Q9HCC9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms