Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC005300.1-201ENST00000428401 373 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 CYCSP32-201ENST00000440548 321 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 HMGN2P10-201ENST00000448085 265 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AC013470.1-201ENST00000453438 462 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 U3.44-201ENST00000458938 192 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 RN7SL93P-201ENST00000463035 293 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 RNU6-581P-201ENST00000516214 105 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 SCARNA15.1-201ENST00000516384 125 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 SCARNA16.2-201ENST00000516520 172 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 RNA5SP384-201ENST00000516615 116 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AP005902.1-201ENST00000521358 186 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 BRDTP1-201ENST00000605735 677 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 MIR8058-201ENST00000615737 89 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AC119674.1-207ENST00000641355 633 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AL136164.4-201ENST00000625013 2135 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC034236.1-201ENST00000469891 373 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AP002884.2-201ENST00000471647 395 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC116655.1-201ENST00000508324 901 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 PTP4A1P4-201ENST00000512479 322 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 RNU6-470P-201ENST00000515954 104 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 RNU6-976P-201ENST00000516086 111 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 RNU6-612P-201ENST00000516909 102 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC008011.1-201ENST00000545989 227 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC078795.3-201ENST00000602913 472 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 SNORA51-201ENST00000606420 132 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 XIST_intron.1-201ENST00000619444 68 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 PLCE1P1-201ENST00000622094 305 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC090617.7-201ENST00000623952 126 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AP000553.6-201ENST00000641242 118 ntBASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC113Q9H0I3 AC010733.2-201ENST00000589496 5702 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 RNU6-336P-201ENST00000364891 107 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 RNU1-100P-201ENST00000365255 165 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 RNU6-596P-201ENST00000365395 98 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 Y_RNA.395-201ENST00000383945 109 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 SNORD116-20-201ENST00000384529 92 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 MTND3P9-201ENST00000429526 346 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 AC091286.1-201ENST00000431233 461 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 NDUFB1P1-201ENST00000435191 180 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 HMGN2P13-201ENST00000476476 274 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 SNORA31.1-201ENST00000515993 133 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 SNORA31.5-201ENST00000516190 133 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 MIR8076-201ENST00000611401 83 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 AC007823.1-201ENST00000569932 1566 ntBASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC113Q9H0I3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 SNORA71.3-201ENST00000362582 128 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 Y_RNA.162-201ENST00000363683 102 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 U8.8-201ENST00000365399 135 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 RNU6-1077P-201ENST00000410506 102 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 ARF4P2-201ENST00000430209 526 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 RPS3AP46-201ENST00000448352 682 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AL136097.1-201ENST00000456945 913 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AL163540.1-201ENST00000485382 386 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AC068781.1-201ENST00000488231 618 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AC022493.2-201ENST00000506122 481 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AC104619.4-201ENST00000510773 249 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms