Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 HAUS6P2-201ENST00000433254 2404 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 MIR424-201ENST00000362227 98 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 Y_RNA.40-201ENST00000362645 93 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6-655P-201ENST00000362858 107 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 SNORD3E-201ENST00000362899 217 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6-433P-201ENST00000363216 104 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6-1164P-201ENST00000364428 107 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6-253P-201ENST00000384730 105 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6-1000P-201ENST00000391066 106 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU2-41P-201ENST00000410991 178 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 MTATP6P20-201ENST00000414147 562 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC003989.2-201ENST00000440224 169 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RPL7P36-201ENST00000444633 681 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AL358794.1-201ENST00000445689 381 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC245102.2-201ENST00000448956 180 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 SSXP1-201ENST00000453640 473 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 snoU109.2-201ENST00000459316 135 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AL121594.1-201ENST00000475906 575 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 HMGB1P30-201ENST00000492455 606 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC104564.1-201ENST00000493028 407 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AP004247.1-201ENST00000531556 1289 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 BX248123.2-201ENST00000606318 124 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC080013.3-201ENST00000606839 578 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 MIR15A-201ENST00000607334 83 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AL392048.1-201ENST00000613946 534 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AL132822.1-201ENST00000617063 513 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AL590808.1-201ENST00000618696 141 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC091965.5-201ENST00000624785 342 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 MIR3529-201ENST00000637713 78 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 AC013437.2-201ENST00000639587 677 ntBASIC1.17□□□□□ -2.22
NKX6-2Q9C056 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NKX6-2Q9C056 RNU6-212P-201ENST00000362642 104 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 RNU6-395P-201ENST00000365662 106 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 RNU6-439P-201ENST00000384188 106 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 RNU6-611P-201ENST00000384276 104 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC009310.1-201ENST00000414414 451 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC006946.1-201ENST00000429106 328 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 SNORD97-201ENST00000459187 142 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 RNU6-250P-201ENST00000516958 103 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC022616.8-201ENST00000533569 253 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 MIR1273C-201ENST00000578669 77 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 KC877982.1-201ENST00000602313 470 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 CYP2C61P-201ENST00000604072 290 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 PRR13P7-201ENST00000605538 430 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC064859.1-201ENST00000624741 174 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX6-2Q9C056 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 AC006026.1-201ENST00000444025 1803 ntBASIC1.16□□□□□ -2.22
NKX6-2Q9C056 RNU1-58P-201ENST00000362413 163 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 RNU6-529P-201ENST00000363383 104 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NKX6-2Q9C056 RNU6-843P-201ENST00000384454 104 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 PIGPP2-201ENST00000411569 458 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AL365338.1-201ENST00000422282 858 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.15□□□□□ -2.23
NKX6-2Q9C056 HMGB3P12-201ENST00000438745 556 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 HMGB1P18-201ENST00000438801 619 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 MTND3P1-201ENST00000441336 220 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC003071.1-201ENST00000451219 789 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 RPL23AP35-201ENST00000451906 501 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AMD1P1-201ENST00000457220 922 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 FAM206BP-201ENST00000510179 541 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC010486.1-201ENST00000511793 424 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.15□□□□□ -2.23
NKX6-2Q9C056 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 RNU6-1092P-201ENST00000516955 87 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC068587.4-201ENST00000533893 186 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC078795.2-201ENST00000602835 1252 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms