Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RAC1P2-201ENST00000511164 579 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RN7SKP18-201ENST00000516005 275 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU6-572P-201ENST00000516724 80 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC009812.2-201ENST00000517657 457 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC026403.1-201ENST00000518938 295 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC025946.2-201ENST00000603398 234 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC244205.2-202ENST00000635781 342 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC009093.8-201ENST00000641769 292 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC118273.1-201ENST00000525324 3006 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RPL9P7-201ENST00000330965 580 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RNA5SP119-201ENST00000362715 117 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RNU6-1317P-201ENST00000364582 104 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.512-201ENST00000384518 102 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AL138885.1-201ENST00000405921 675 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 NUP35P1-201ENST00000422734 947 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC091286.1-201ENST00000431233 461 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AL513043.1-201ENST00000439124 535 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 SNORA71B-202ENST00000439232 272 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AL078601.1-201ENST00000444542 271 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RPS3AP46-201ENST00000448352 682 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RPL9P9-202ENST00000466501 579 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RN7SL283P-201ENST00000489055 303 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC114801.2-201ENST00000503825 781 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RNU6-1271P-201ENST00000517049 105 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 RNU6-794P-201ENST00000517261 64 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC022616.4-201ENST00000522985 181 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 HMGB1P14-201ENST00000557424 591 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AL355297.3-201ENST00000604082 446 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC019176.2-201ENST00000611579 315 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 MIR4272-201ENST00000635924 64 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AL133412.1-201ENST00000380194 2992 ntBASIC3.55□□□□□ -1.84
NDC1Q9BTX1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
NDC1Q9BTX1 AC093908.1-201ENST00000623125 8092 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AL672296.1-201ENST00000427780 2158 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC007685.1-201ENST00000329806 452 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.106-201ENST00000363189 100 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 RNY3P11-201ENST00000364153 102 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 U8.8-201ENST00000365399 135 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.380-201ENST00000365663 111 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 RNU6-166P-201ENST00000384371 107 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 SNORD56-201ENST00000413522 71 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC098614.2-201ENST00000426040 255 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 SNRPGP5-201ENST00000456003 220 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC092798.1-201ENST00000458542 409 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 RNA5SP208-201ENST00000516156 78 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC131281.1-201ENST00000522984 164 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 CASP1P1-201ENST00000526345 212 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 MYL12BP1-201ENST00000569826 507 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC090740.1-201ENST00000623193 2262 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
NDC1Q9BTX1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.54□□□□□ -1.84
NDC1Q9BTX1 AC008669.1-201ENST00000565823 2178 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDC1Q9BTX1 RNU4-42P-201ENST00000364738 142 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 RNU6-827P-201ENST00000365553 106 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 SNORD14.1-201ENST00000365609 90 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 YPEL5P1-201ENST00000419731 367 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 RPS6P12-201ENST00000432491 726 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 RPL21P2-201ENST00000440049 481 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 PRSS3P4-201ENST00000453323 162 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.53□□□□□ -1.84
NDC1Q9BTX1 RPS4XP13-201ENST00000483219 789 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms