Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 RNU1-140P-201ENST00000365040 165 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.527-201ENST00000384573 102 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MIR578-201ENST00000384828 96 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 SNORD17-201ENST00000390930 237 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 RPL26P27-201ENST00000414397 437 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 USP9YP16-201ENST00000430287 407 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 SETP5-201ENST00000437270 562 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AC010095.1-201ENST00000443543 144 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AL360271.2-201ENST00000447710 161 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AL513124.1-201ENST00000450410 614 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MTATP6P7-201ENST00000453315 681 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 USP9YP23-201ENST00000455085 407 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 RPL12P25-201ENST00000455592 494 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 RN7SL283P-201ENST00000489055 303 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MTND4LP22-201ENST00000508209 276 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 NACAP3-201ENST00000552100 481 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MIR4435-1-201ENST00000582552 80 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AL138726.1-201ENST00000614873 333 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AC007485.1-201ENST00000616755 206 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 AC073308.1-201ENST00000623696 305 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MTND5P30-201ENST00000452896 1731 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRFN3Q9BTN0 MTND5P7-201ENST00000413558 1798 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 RNU6-702P-201ENST00000364982 107 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AL138885.1-201ENST00000405921 675 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 RPS4XP7-201ENST00000406274 780 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 MIR1302-3-201ENST00000408128 138 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 RNU6-607P-201ENST00000411283 108 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 ATG3P1-201ENST00000419507 911 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC098614.2-201ENST00000426040 255 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 RPL23AP82-202ENST00000427528 469 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 HMGB1P9-201ENST00000429856 646 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 HMGN2P20-201ENST00000437531 273 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 Z75741.1-201ENST00000446793 314 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC022493.1-201ENST00000492984 337 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC097473.1-201ENST00000508142 408 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC008526.1-201ENST00000509149 338 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 SNORA25.10-201ENST00000515926 124 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 SNORA14.1-201ENST00000516113 141 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 MIR892C-201ENST00000516410 77 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC025755.1-201ENST00000521306 278 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 TRAV37-201ENST00000553906 342 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AL161670.1-201ENST00000554348 137 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 NUTF2P8-201ENST00000604593 363 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 RMST_4.1-201ENST00000616886 107 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AL162373.1-201ENST00000620433 407 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AC103858.2-201ENST00000621471 543 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 AL031601.2-202ENST00000622650 282 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 IGHVIII-44-202ENST00000636235 289 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 KPNA2P1-201ENST00000458289 1591 ntBASIC3.68□□□□□ -1.82
LRFN3Q9BTN0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms