Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 FTLP6-201ENST00000355274 422 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 RNU4-90P-201ENST00000362773 141 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 Y_RNA.199-201ENST00000364014 102 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ELOCP19-201ENST00000411919 318 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 TMSB10P2-201ENST00000416049 131 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 AP000907.1-201ENST00000428428 510 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 RPL23AP1-201ENST00000428990 471 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ABCF2P2-201ENST00000450549 296 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 AC025445.1-201ENST00000502728 300 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-496P-201ENST00000516145 99 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 CYCSP39-201ENST00000565821 309 ntBASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TRIM56Q9BRZ2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC068254.2-201ENST00000623938 3577 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-1301P-201ENST00000362724 104 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-774P-201ENST00000363238 107 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-105P-201ENST00000363909 104 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 SNORD74.4-201ENST00000364129 80 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 SNORA53-201ENST00000391141 249 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 MIR888-201ENST00000401186 77 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 RNA5SP129-201ENST00000410276 118 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 HMGN2P30-201ENST00000423237 256 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 U8.22-201ENST00000459141 133 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 RPS26P21-201ENST00000475397 348 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 SEPT14P8-201ENST00000508026 178 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC006499.6-201ENST00000511169 607 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC015795.1-201ENST00000513669 327 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-1183P-201ENST00000517054 60 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC009541.1-201ENST00000438279 2662 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 AC011266.1-201ENST00000624119 3569 ntBASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM56Q9BRZ2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 MIR411-201ENST00000362239 96 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-778P-201ENST00000363269 103 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-968P-201ENST00000384076 107 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 SNORD63-201ENST00000384262 68 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-937P-201ENST00000384325 106 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 MIR325-201ENST00000385260 98 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 PCNPP3-201ENST00000393579 471 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 Z82188.1-201ENST00000436709 154 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 snoU109.2-201ENST00000459316 135 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RNU7-120P-201ENST00000459334 63 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 Y_RNA.703-201ENST00000516846 111 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RN7SKP272-201ENST00000516988 232 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 AP002392.1-201ENST00000537692 208 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 CBX3P4-201ENST00000538909 354 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 AC023824.2-201ENST00000566185 400 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 CYP4A43P-201ENST00000568156 121 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 MIR3910-1-201ENST00000580936 111 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RMST_6.1-201ENST00000611980 203 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 AL023881.1-201ENST00000621088 301 ntBASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM56Q9BRZ2 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 MIR331-201ENST00000362302 94 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 SNORD115-32-201ENST00000364079 82 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-17P-201ENST00000384245 107 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-18P-201ENST00000384527 107 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 RNU2-20P-201ENST00000410425 191 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 NDUFS5P4-201ENST00000412983 318 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 EIF1AXP1-201ENST00000419267 435 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AC009296.1-201ENST00000443146 155 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms