Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MIR5696-201ENST00000578474 85 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 AL451007.1-201ENST00000595491 289 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 AC023043.4-201ENST00000612081 449 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 HMGB1P24-202ENST00000615653 685 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 MIR6076-201ENST00000617521 113 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 AC008121.3-201ENST00000618726 433 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.37□□□□□ -2.03
LITAFQ99732 MIR3653-201ENST00000625572 110 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 AC073476.4-201ENST00000628409 72 ntBASIC2.37□□□□□ -2.03
LITAFQ99732 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.37□□□□□ -2.03
LITAFQ99732 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LITAFQ99732 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
LITAFQ99732 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LITAFQ99732 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LITAFQ99732 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.36□□□□□ -2.03
LITAFQ99732 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LITAFQ99732 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LITAFQ99732 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LITAFQ99732 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LITAFQ99732 Y_RNA.527-201ENST00000384573 102 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 Y_RNA.577-201ENST00000384794 101 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 MIR621-201ENST00000384919 96 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.36□□□□□ -2.03
LITAFQ99732 AL356057.3-201ENST00000402607 340 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 SNORA11B-201ENST00000408175 129 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AL358176.2-201ENST00000425769 204 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC009969.1-201ENST00000438726 172 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC006026.2-201ENST00000457376 180 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 RPL26P9-201ENST00000457466 433 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 FTH1P2-201ENST00000466086 412 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC010618.1-201ENST00000469924 477 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC128713.1-201ENST00000471495 306 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.36□□□□□ -2.03
LITAFQ99732 AC021146.2-201ENST00000504736 556 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC116655.1-201ENST00000508324 901 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.36□□□□□ -2.03
LITAFQ99732 RNU1-143P-201ENST00000516296 146 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 SNORA31.18-201ENST00000517043 134 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 SCARNA20.6-201ENST00000517251 106 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC107934.2-201ENST00000518653 310 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.36□□□□□ -2.03
LITAFQ99732 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.36□□□□□ -2.03
LITAFQ99732 NACAP3-201ENST00000552100 481 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AL391261.3-201ENST00000557194 520 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.36□□□□□ -2.03
LITAFQ99732 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC2.36□□□□□ -2.03
LITAFQ99732 AC020895.1-201ENST00000595362 272 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 IPO5P1-202ENST00000600039 287 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 VN1R107P-201ENST00000601784 209 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 FAM25E-202ENST00000608562 189 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 U1.23-201ENST00000610293 146 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC099778.2-201ENST00000610904 211 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 RNU1-68P-201ENST00000615382 146 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC002076.2-201ENST00000617362 122 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AL162373.1-201ENST00000620433 407 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 U1.39-201ENST00000621562 146 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 AC073308.1-201ENST00000623696 305 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LITAFQ99732 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LITAFQ99732 MTND5P7-201ENST00000413558 1798 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 MTND5P9-201ENST00000503854 1755 ntBASIC2.36□□□□□ -2.03
LITAFQ99732 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.36□□□□□ -2.03
LITAFQ99732 ZNF299P-201ENST00000406845 1804 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 AC005592.1-201ENST00000566527 1640 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
LITAFQ99732 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.35□□□□□ -2.03
LITAFQ99732 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LITAFQ99732 CDC27P3-201ENST00000635418 1910 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
LITAFQ99732 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LITAFQ99732 RNU6-227P-201ENST00000362865 103 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 SNORD50.1-201ENST00000362987 71 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 Y_RNA.80-201ENST00000362996 102 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RNU6-527P-201ENST00000363425 104 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 Y_RNA.133-201ENST00000363428 110 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 Y_RNA.314-201ENST00000365114 102 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RNU1-100P-201ENST00000365255 165 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RNU6-1105P-201ENST00000384774 107 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 MIR323B-201ENST00000385269 82 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 Y_RNA.645-201ENST00000391229 102 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 AC092642.1-201ENST00000392417 425 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 AL138885.1-201ENST00000405921 675 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RNU6-1156P-201ENST00000410365 100 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RNU2-23P-201ENST00000410545 195 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RAB9AP3-201ENST00000412737 573 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.35□□□□□ -2.03
LITAFQ99732 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.35□□□□□ -2.03
LITAFQ99732 BPY2DP-201ENST00000422208 265 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 SNRPEP4-201ENST00000435815 279 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.35□□□□□ -2.03
LITAFQ99732 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.35□□□□□ -2.03
LITAFQ99732 RAB9AP1-201ENST00000449393 573 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RN7SL303P-201ENST00000469773 251 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RN7SL177P-201ENST00000476596 299 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RPL30P14-201ENST00000482744 348 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RPL32P34-201ENST00000486380 400 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RN7SL283P-201ENST00000489055 303 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 AC091167.1-201ENST00000492017 396 ntBASIC2.35□□□□□ -2.03
LITAFQ99732 RPL23AP49-201ENST00000492925 468 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms