Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TIMP4Q99727 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.31□□□□□ -1.88
TIMP4Q99727 AC017083.1-201ENST00000428093 483 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AC007919.1-201ENST00000429380 217 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RPL21P2-201ENST00000440049 481 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.31□□□□□ -1.88
TIMP4Q99727 CHEK2P4-201ENST00000450340 246 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 PCNPP5-201ENST00000452246 481 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RNU7-169P-201ENST00000459456 61 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 HMGN2P13-201ENST00000476476 274 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AC131281.1-201ENST00000522984 164 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TIMP4Q99727 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 SNRPGP15-201ENST00000600149 222 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AC100812.1-201ENST00000607622 580 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.31□□□□□ -1.88
TIMP4Q99727 AC019176.2-201ENST00000611579 315 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TIMP4Q99727 SDAD1P2-201ENST00000441308 2028 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TIMP4Q99727 TNPO1P3-201ENST00000436471 2662 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TIMP4Q99727 AC058791.1-201ENST00000608412 3198 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
TIMP4Q99727 RPL9P7-201ENST00000330965 580 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNY1P16-201ENST00000363063 111 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNU6-1317P-201ENST00000364582 104 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 SNORD14.1-201ENST00000365609 90 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNU6-395P-201ENST00000365662 106 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 MT-TG-201ENST00000387429 68 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AL513475.1-201ENST00000406602 315 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNA5SP44-201ENST00000410446 133 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
TIMP4Q99727 USP9YP16-201ENST00000430287 407 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AL513043.1-201ENST00000439124 535 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 DYNLT3P2-201ENST00000442517 295 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 USP9YP23-201ENST00000455085 407 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AC112492.4-201ENST00000456549 352 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RPL9P9-202ENST00000466501 579 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
TIMP4Q99727 AC110768.1-201ENST00000509222 400 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNU6-475P-201ENST00000516073 104 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNU6-1256P-201ENST00000516539 103 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
TIMP4Q99727 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.3□□□□□ -1.88
TIMP4Q99727 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.3□□□□□ -1.88
TIMP4Q99727 MED28P6-201ENST00000558776 231 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 ZNF192P1-203ENST00000565888 810 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.3□□□□□ -1.88
TIMP4Q99727 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.3□□□□□ -1.88
TIMP4Q99727 MIR3944-201ENST00000581277 108 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 MIR3922-201ENST00000585192 84 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
TIMP4Q99727 AC069200.1-201ENST00000609511 323 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 RNVU1-4-201ENST00000612985 164 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.3□□□□□ -1.88
TIMP4Q99727 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.3□□□□□ -1.88
TIMP4Q99727 AP000553.6-201ENST00000641242 118 ntBASIC3.3□□□□□ -1.88
TIMP4Q99727 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
TIMP4Q99727 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TIMP4Q99727 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TIMP4Q99727 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TIMP4Q99727 Y_RNA.106-201ENST00000363189 100 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 Y_RNA.152-201ENST00000363578 100 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 RNU6-335P-201ENST00000364563 113 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 MIR218-2-201ENST00000385006 110 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TIMP4Q99727 RN7SKP58-201ENST00000411010 305 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.29□□□□□ -1.88
TIMP4Q99727 EI24P1-201ENST00000416584 867 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
TIMP4Q99727 RPS15AP10-201ENST00000432472 382 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 DAP3P1-201ENST00000441522 278 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 RPL31P13-201ENST00000484151 370 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.29□□□□□ -1.88
TIMP4Q99727 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.29□□□□□ -1.88
TIMP4Q99727 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AC022616.4-201ENST00000522985 181 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
TIMP4Q99727 AC008011.1-201ENST00000545989 227 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.29□□□□□ -1.88
TIMP4Q99727 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
TIMP4Q99727 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TIMP4Q99727 MIR5188-201ENST00000583467 113 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.29□□□□□ -1.88
TIMP4Q99727 AL355297.3-201ENST00000604082 446 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.29□□□□□ -1.88
TIMP4Q99727 U3.45-201ENST00000607547 219 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TIMP4Q99727 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.29□□□□□ -1.88
TIMP4Q99727 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.29□□□□□ -1.88
TIMP4Q99727 MIR4272-201ENST00000635924 64 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 USP8P1-201ENST00000494673 3183 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 AF127577.6-201ENST00000623352 2191 ntBASIC3.29□□□□□ -1.88
TIMP4Q99727 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TIMP4Q99727 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms