Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNA5SP165-201ENST00000517142 115 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 MRPS36P5-201ENST00000551909 298 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.85□□□□□ -2.11
CDX2Q99626 MIR4999-201ENST00000585029 91 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.85□□□□□ -2.11
CDX2Q99626 BNIP3P23-201ENST00000599655 511 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 AC146944.4-201ENST00000602697 718 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 AC008121.1-201ENST00000603244 268 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 SEPT7P9-203ENST00000604116 343 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.85□□□□□ -2.11
CDX2Q99626 AL449363.1-201ENST00000617815 186 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.85□□□□□ -2.11
CDX2Q99626 AC091895.1-201ENST00000624494 256 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 AC010889.1-201ENST00000566193 2666 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDX2Q99626 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDX2Q99626 MTND4P16-201ENST00000466108 1367 ntBASIC1.85□□□□□ -2.11
CDX2Q99626 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.85□□□□□ -2.11
CDX2Q99626 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
CDX2Q99626 AC131280.1-202ENST00000624067 4211 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX2Q99626 RNY4P24-201ENST00000362735 96 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 RNU6-511P-201ENST00000363496 107 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDX2Q99626 RNU6-1200P-201ENST00000384162 107 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 SNORD116-8-201ENST00000384365 95 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 MTND2P18-201ENST00000419962 1030 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 MTND1P20-201ENST00000430341 950 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 MED14P1-201ENST00000430517 648 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX2Q99626 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 OSTCP8-201ENST00000445117 448 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 HMGN2P10-201ENST00000448085 265 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 MTATP6P7-201ENST00000453315 681 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.84□□□□□ -2.11
CDX2Q99626 AC104435.1-201ENST00000483483 166 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 MRPS33P3-201ENST00000513456 322 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AC022447.1-201ENST00000515358 464 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 RNU6-390P-201ENST00000516259 103 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 SNORD19.2-201ENST00000516978 73 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX2Q99626 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 AL356432.3-201ENST00000568952 465 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 SNORD53B-201ENST00000577887 78 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.84□□□□□ -2.11
CDX2Q99626 AC110760.3-201ENST00000598794 467 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AC018638.7-201ENST00000605836 1114 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AL360219.1-201ENST00000610230 366 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.84□□□□□ -2.11
CDX2Q99626 AL157834.3-201ENST00000615543 103 ntBASIC1.84□□□□□ -2.11
CDX2Q99626 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CDX2Q99626 MTND4P23-201ENST00000447723 1363 ntBASIC1.84□□□□□ -2.12
CDX2Q99626 UBE2L2-201ENST00000254302 429 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 Y_RNA.318-201ENST00000365131 97 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 SNORD116-1-201ENST00000384335 95 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 NDUFS5P1-201ENST00000405668 289 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 MIR1302-8-201ENST00000408342 128 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 MTND1P23-201ENST00000416931 372 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.83□□□□□ -2.12
CDX2Q99626 GDI2P2-201ENST00000445131 608 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC108059.3-201ENST00000456388 214 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.83□□□□□ -2.12
CDX2Q99626 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX2Q99626 AC092991.1-201ENST00000477176 376 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 RPS3AP22-201ENST00000488297 769 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX2Q99626 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX2Q99626 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.83□□□□□ -2.12
CDX2Q99626 RNU6-201P-201ENST00000517100 61 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.83□□□□□ -2.12
CDX2Q99626 AP000907.2-201ENST00000530827 353 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC008015.1-201ENST00000555505 465 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AL137100.2-201ENST00000555786 315 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.83□□□□□ -2.12
CDX2Q99626 Z94722.1-201ENST00000604328 474 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC080013.6-201ENST00000606185 215 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 TUSC7.1-201ENST00000610969 165 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 RMST_6.1-201ENST00000611980 203 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 uc_338.12-201ENST00000616344 181 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AL031667.3-201ENST00000620124 655 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AC131159.1-201ENST00000621854 213 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.83□□□□□ -2.12
CDX2Q99626 AC009487.4-201ENST00000624969 3585 ntBASIC1.83□□□□□ -2.12
CDX2Q99626 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
CDX2Q99626 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.83□□□□□ -2.12
CDX2Q99626 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.83□□□□□ -2.12
CDX2Q99626 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.83□□□□□ -2.12
CDX2Q99626 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDX2Q99626 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDX2Q99626 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms