Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MIR634-201ENST00000385208 97 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 MIR450B-201ENST00000401182 78 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 FGF7P8-201ENST00000402994 292 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AL356968.1-201ENST00000416622 474 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 YME1L1P1-201ENST00000429435 297 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC004383.1-201ENST00000438135 289 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC009296.1-201ENST00000443146 155 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC138Q96M89 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 TRBVA-201ENST00000498804 316 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC018710.1-201ENST00000506509 158 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 RNU5B-3P-201ENST00000516601 115 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 MIR2276-201ENST00000516886 89 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 RNU6-1314P-201ENST00000517139 104 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 SCARNA11.3-201ENST00000517276 130 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 BTF3P12-201ENST00000519620 469 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 CTHRC1P1-201ENST00000605383 469 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 U6.105-201ENST00000637379 88 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC138Q96M89 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC138Q96M89 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC138Q96M89 AC093010.3-201ENST00000570269 15214 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 CASC19-280ENST00000642102 1351 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 AL049781.1-201ENST00000623195 3585 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 HAUS6P2-201ENST00000433254 2404 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC138Q96M89 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 RNU6-254P-201ENST00000363377 107 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 RNA5SP50-201ENST00000363731 107 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 RNU6-1283P-201ENST00000365314 105 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 MIR183-201ENST00000384958 110 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC138Q96M89 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC138Q96M89 RPS3AP12-201ENST00000443616 753 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC138Q96M89 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC138Q96M89 MTCYBP40-201ENST00000509390 1135 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 SCARNA17.1-201ENST00000516211 143 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 SCARNA17.2-201ENST00000516334 143 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 COPS8P3-201ENST00000526024 482 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 RNU6-91P-201ENST00000607774 107 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 AC093913.1-201ENST00000614178 329 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 SCARNA17.4-201ENST00000614296 143 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 AC138627.2-201ENST00000624202 601 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC138Q96M89 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.28□□□□□ -1.88
CCDC138Q96M89 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC138Q96M89 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC138Q96M89 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC138Q96M89 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC138Q96M89 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 RNU6-1083P-201ENST00000384022 107 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 RNU6-843P-201ENST00000384454 104 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 MIR7-3-201ENST00000384898 110 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 AC245166.1-201ENST00000521012 253 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC138Q96M89 MTCO1P12-201ENST00000414273 1543 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC138Q96M89 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
CCDC138Q96M89 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC138Q96M89 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC138Q96M89 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC138Q96M89 RNU6-527P-201ENST00000363425 104 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 SNORA68.1-201ENST00000364537 132 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 Y_RNA.414-201ENST00000384011 101 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 RNU6-1106P-201ENST00000390845 107 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 RNU6-876P-201ENST00000391295 104 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL031121.1-201ENST00000406553 254 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL356776.1-201ENST00000406574 447 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC074117.2-201ENST00000417130 397 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL513185.2-201ENST00000425543 193 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL591043.1-201ENST00000432461 424 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL359672.1-201ENST00000442302 409 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL031274.1-201ENST00000450334 232 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 RPL23AP49-201ENST00000492925 468 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 RN7SKP256-201ENST00000517201 314 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC010186.2-204ENST00000537668 439 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms