Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SCARNA15.3-201ENST00000626315 122 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 SCARNA4.1-201ENST00000628597 123 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 RNY4P16-201ENST00000364768 94 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 MIR634-201ENST00000385208 97 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 RNU2-20P-201ENST00000410425 191 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 RPL30P13-201ENST00000418873 348 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC006366.1-201ENST00000422002 759 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AL591212.2-201ENST00000433923 257 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 Z73417.1-201ENST00000447373 778 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AL049873.1-201ENST00000480540 376 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 RNU6-677P-201ENST00000516914 101 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC022616.6-201ENST00000520479 119 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AP001981.2-201ENST00000603241 418 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC174048.1-201ENST00000603389 144 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC121334.2-201ENST00000605387 271 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 AC006338.1-201ENST00000618453 749 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 MIR6873-201ENST00000622788 63 ntBASIC1.94□□□□□ -2.1
PKNOX2Q96KN3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 RNU6-960P-201ENST00000364056 120 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 SNORD26-201ENST00000384147 75 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 RNU6-809P-201ENST00000384461 107 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 RPL22P18-201ENST00000417197 377 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AL353706.1-201ENST00000436728 494 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC023194.1-201ENST00000493084 308 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC114781.4-201ENST00000513707 639 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 RNU2-10P-201ENST00000516375 211 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 RNU6-914P-201ENST00000516749 109 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 SNORA31.19-201ENST00000517079 126 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC079598.5-201ENST00000547460 117 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 MIR3118-1-201ENST00000581787 76 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC011458.1-201ENST00000604034 617 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC022893.3-201ENST00000607665 437 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC034229.4-201ENST00000607861 441 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AP000240.1-201ENST00000609910 452 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC138627.2-201ENST00000624202 601 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 AC010149.2-201ENST00000637608 315 ntBASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PKNOX2Q96KN3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 RNU4-28P-201ENST00000364739 141 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 SNORA4.3-201ENST00000365564 137 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 RNU6-898P-201ENST00000365627 104 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 RNU6-939P-201ENST00000384634 107 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 MIR518D-201ENST00000385014 87 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 SNORA40C-201ENST00000391285 128 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AC098592.1-201ENST00000419352 333 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 RPL22P17-201ENST00000438729 315 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 HMGB1P18-201ENST00000438801 619 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 RPS15AP9-201ENST00000439856 381 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AC093899.1-201ENST00000457984 376 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AL139824.2-201ENST00000458731 1095 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AC109927.2-201ENST00000506416 303 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 RNU6-1315P-201ENST00000517187 99 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AC012213.3-201ENST00000577199 777 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AC130324.3-201ENST00000614165 542 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 MIR7974-201ENST00000615835 79 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 AC017037.3-201ENST00000625016 472 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
PKNOX2Q96KN3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 RNU6-946P-201ENST00000383878 107 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 SNORD115.1-201ENST00000391109 76 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 RNU1-78P-201ENST00000391248 165 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 RPL17P50-201ENST00000396131 546 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AL356320.1-201ENST00000429616 163 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AL078601.1-201ENST00000444542 271 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 SSXP1-201ENST00000453640 473 ntBASIC1.91□□□□□ -2.1
PKNOX2Q96KN3 MTND1P12-201ENST00000455231 147 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms