Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.2-201ENST00000362330 96 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 SNORA63.1-201ENST00000362493 131 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 RNU6-884P-201ENST00000363889 107 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.326-201ENST00000365176 113 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 RNU1-73P-201ENST00000383971 164 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.445-201ENST00000384168 102 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.646-201ENST00000410980 101 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 BTF3P15-201ENST00000455606 336 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 MTCO3P10-201ENST00000455912 772 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 snoU109.2-201ENST00000459316 135 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 RPL23AP45-201ENST00000476406 468 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 AC113155.1-201ENST00000511141 769 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 SCARNA15.1-201ENST00000516384 125 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 RNU6-928P-201ENST00000516876 104 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 RNU6-1183P-201ENST00000517054 60 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 AC005899.2-201ENST00000584353 90 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 SCARNA4-202ENST00000625402 129 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 U2.21-201ENST00000637295 81 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 U6.105-201ENST00000637379 88 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RNU6-778P-201ENST00000363269 103 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RNU5E-7P-201ENST00000365290 117 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AP000567.1-201ENST00000406413 156 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RPL31P12-201ENST00000422587 358 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 USP9YP30-201ENST00000430729 455 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL590664.1-201ENST00000448065 339 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RPL7P42-201ENST00000481005 679 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RPL32P34-201ENST00000486380 400 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC090096.1-201ENST00000489168 390 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RNU6-377P-201ENST00000515965 102 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 ACA59.1-201ENST00000515966 143 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RNU6-1213P-201ENST00000517075 94 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 IGKV2-26-201ENST00000518305 343 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC010186.2-204ENST00000537668 439 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC020661.2-201ENST00000560114 134 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 MIR3171-201ENST00000584270 74 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC012468.1-201ENST00000604888 430 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC018889.1-201ENST00000605372 397 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL121917.1-203ENST00000605534 577 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 PART1_1.1-201ENST00000611761 217 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL161629.2-201ENST00000615347 275 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AL513302.2-201ENST00000562313 1842 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AC091152.2-201ENST00000591628 2569 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
CTHRC1Q96CG8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 RPL9P7-201ENST00000330965 580 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 MIR208A-201ENST00000362287 71 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.162-201ENST00000363683 102 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.202-201ENST00000364083 110 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 RNU6-827P-201ENST00000365553 106 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 RNU6-474P-201ENST00000384243 107 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 snosnR66.1-201ENST00000391095 99 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 U3.37-201ENST00000408528 213 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 RNA5SP31-201ENST00000411144 127 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 USMG5P1-201ENST00000425964 177 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AL513043.1-201ENST00000439124 535 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 HIGD1AP2-201ENST00000446367 280 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 257 ms