Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RNU6-280P-201ENST00000364145 104 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP175-201ENST00000364275 119 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 Z98749.2-208ENST00000381646 500 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP146-201ENST00000410743 123 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP31-201ENST00000411144 127 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AL590383.1-201ENST00000428602 75 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 Z82210.1-201ENST00000440037 231 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC022795.1-201ENST00000473808 480 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 RNU6-1012P-201ENST00000516606 109 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 CYCSP39-201ENST00000565821 309 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 RN7SL600P-201ENST00000581811 299 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC053481.4-201ENST00000583164 216 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC240442.1-201ENST00000616055 283 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC027309.3-201ENST00000623419 351 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AC097372.5-201ENST00000623665 376 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 SCARNA4-202ENST00000625402 129 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 AL672296.1-201ENST00000427780 2158 ntBASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.86□□□□□ -1.63
VTI1AQ96AJ9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 AC008568.2-201ENST00000623862 2313 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 AC002546.1-201ENST00000588041 2504 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 RNU1-108P-201ENST00000362556 161 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 MIR325-201ENST00000385260 98 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 PTMAP2-201ENST00000397627 327 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 CYCSP32-201ENST00000440548 321 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 RPL35AP15-201ENST00000468042 339 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 RPS26P28-201ENST00000470806 348 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP519-201ENST00000516480 119 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 MIR2355-201ENST00000517199 87 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 AC023824.2-201ENST00000566185 400 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 RPL23AP97-201ENST00000568955 471 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 AC090617.3-201ENST00000573670 475 ntBASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1AQ96AJ9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 RNU6-1266P-201ENST00000362794 105 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 Y_RNA.150-201ENST00000363562 102 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP130-201ENST00000364431 114 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 Y_RNA.269-201ENST00000364685 89 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 Y_RNA.297-201ENST00000364950 91 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 Y_RNA.581-201ENST00000391017 97 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 BTF3L4P2-201ENST00000392798 346 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 RPL21P65-201ENST00000406094 466 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 MIR548M-201ENST00000408260 86 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 CYCSP19-201ENST00000411715 316 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 RPS29P7-201ENST00000439662 171 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 snoU13.30-201ENST00000458951 104 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 RPS23P5-201ENST00000495419 428 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AC146944.2-203ENST00000502493 354 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AC139495.1-202ENST00000513164 354 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP73-201ENST00000516744 108 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 Y_RNA.772-201ENST00000606692 102 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AC011476.5-201ENST00000615594 130 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AL021997.2-201ENST00000615674 271 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 AL138721.1-201ENST00000616756 179 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.84□□□□□ -1.63
VTI1AQ96AJ9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.84□□□□□ -1.64
VTI1AQ96AJ9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VTI1AQ96AJ9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 AC233981.2-201ENST00000611524 1614 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 Y_RNA.29-201ENST00000362570 113 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 RNU6-1301P-201ENST00000362724 104 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 RNU6-937P-201ENST00000384325 106 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 RNU6-102P-201ENST00000384485 104 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 MIR200C-201ENST00000384980 68 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 SNORA43.2-201ENST00000516652 128 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 RNA5SP143-201ENST00000516936 115 ntBASIC4.83□□□□□ -1.64
VTI1AQ96AJ9 RNU6-703P-201ENST00000516946 107 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms