Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SNORA11.2-201ENST00000408318 127 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-CQ95604 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-CQ95604 BPY2DP-201ENST00000422208 265 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 AL356387.2-201ENST00000422272 243 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 RPL21P66-201ENST00000426566 466 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 COX6CP13-201ENST00000428703 226 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-CQ95604 RPL39P29-201ENST00000447779 157 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 U8.19-201ENST00000459095 133 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-CQ95604 RNU1-6P-201ENST00000516290 144 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 RNA5SP143-201ENST00000516936 115 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-CQ95604 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 MTND6P33-201ENST00000571794 183 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-CQ95604 MIR6075-201ENST00000620782 95 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HLA-CQ95604 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-CQ95604 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-CQ95604 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 AC004817.4-201ENST00000602396 3625 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-CQ95604 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-CQ95604 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 AC002543.1-201ENST00000299783 1954 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-CQ95604 RNU6-801P-201ENST00000364087 105 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 RNU6-1280P-201ENST00000365211 107 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 Y_RNA.542-201ENST00000384641 111 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 MIR554-201ENST00000384874 96 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 RN7SKP267-201ENST00000410381 285 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 RNU6-628P-201ENST00000410675 107 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-CQ95604 RPS29P17-201ENST00000430795 166 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 AL356535.1-201ENST00000440335 398 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 RNU7-197P-201ENST00000458836 62 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 RN7SL441P-201ENST00000492388 296 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 RNU6-659P-201ENST00000516454 104 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 IGLVIV-65-201ENST00000517313 360 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 AC090897.2-201ENST00000581715 130 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 Y_RNA.802-201ENST00000614892 130 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 AP001340.1-201ENST00000624405 217 ntBASIC5.02□□□□□ -1.61
HLA-CQ95604 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HLA-CQ95604 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-CQ95604 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-CQ95604 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-CQ95604 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-CQ95604 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-CQ95604 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-CQ95604 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-CQ95604 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-CQ95604 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-CQ95604 AC010329.5-201ENST00000623497 2174 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-CQ95604 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-CQ95604 RNU6-324P-201ENST00000363957 106 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 RNA5SP387-201ENST00000364226 106 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 snoU2_19.4-201ENST00000364329 80 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 SNORA71.2-201ENST00000364941 134 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 MIR526A2-201ENST00000390198 65 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-CQ95604 AL590762.2-201ENST00000395798 571 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 AL357515.1-201ENST00000402967 542 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 TBCAP1-201ENST00000436520 327 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 NDUFB4P6-201ENST00000436819 366 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-CQ95604 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-CQ95604 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 AC105137.1-201ENST00000484355 562 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 PDCD5P2-201ENST00000507570 312 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 AC091868.1-201ENST00000508746 304 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-CQ95604 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-CQ95604 LARP7P3-201ENST00000579888 337 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms