Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 FCF1P9-201ENST00000412546 282 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 PRPS1P1-201ENST00000445305 876 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 RPL31P41-201ENST00000477967 372 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 GZMAP1-201ENST00000503054 631 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 FAM92A1P2-202ENST00000504766 877 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 MRPS36P2-201ENST00000512569 299 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 Y_RNA.704-201ENST00000516851 102 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC109635.3-201ENST00000529536 185 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 TPRKBP2-201ENST00000565969 475 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
HERVK_113Q902F9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HERVK_113Q902F9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 U8.2-201ENST00000363156 134 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 RNU4-12P-201ENST00000365233 139 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 RPS4XP7-201ENST00000406274 780 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 BMS1P22-201ENST00000414726 313 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 ARL5AP1-201ENST00000418991 388 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 RPL23AP58-201ENST00000440453 469 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC116655.1-201ENST00000508324 901 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 MTND3P25-201ENST00000509243 135 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 RNU6-581P-201ENST00000516214 105 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 Y_RNA.676-201ENST00000516393 96 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 SNORD60.2-201ENST00000516883 86 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AP004607.1-201ENST00000524456 203 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 SNORD53-201ENST00000579969 78 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC020895.1-201ENST00000595362 272 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC073539.2-201ENST00000597113 165 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AL158827.2-201ENST00000602494 330 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 RMST_4.1-201ENST00000616886 107 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 YWHAEP7-203ENST00000622054 312 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AL031601.2-202ENST00000622650 282 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AL691447.3-201ENST00000635020 330 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 MIR1321-201ENST00000637766 79 ntBASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
HERVK_113Q902F9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.14□□□□□ -1.91
HERVK_113Q902F9 RNU4-66P-201ENST00000365199 138 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 Z98749.2-208ENST00000381646 500 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 RNU6-483P-201ENST00000384088 108 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 RNU6-607P-201ENST00000411283 108 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AL592148.1-201ENST00000413568 445 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 SAR1AP4-201ENST00000429225 591 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.14□□□□□ -1.91
HERVK_113Q902F9 RNU7-180P-201ENST00000459240 63 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AC011005.2-201ENST00000487324 359 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AC069113.1-201ENST00000517763 267 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.14□□□□□ -1.91
HERVK_113Q902F9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 DISC2.1-201ENST00000612827 205 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 AC026585.1-201ENST00000619582 524 ntBASIC3.14□□□□□ -1.91
HERVK_113Q902F9 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.14□□□□□ -1.91
HERVK_113Q902F9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
HERVK_113Q902F9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HERVK_113Q902F9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.13□□□□□ -1.91
HERVK_113Q902F9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HERVK_113Q902F9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.13□□□□□ -1.91
HERVK_113Q902F9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HERVK_113Q902F9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 MIR30E-201ENST00000362104 92 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 RNU6-858P-201ENST00000362436 107 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 RNU6-859P-201ENST00000362728 107 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 Y_RNA.505-201ENST00000384489 102 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 RNU6-780P-201ENST00000391030 104 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 CIR1P3-201ENST00000405137 479 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 PGBD4P6-201ENST00000421501 610 ntBASIC3.13□□□□□ -1.91
HERVK_113Q902F9 MTCO1P20-201ENST00000425366 358 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms